| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3249 |
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| Symbol | |
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| ID | 3935721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3298990 |
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| End bp | 3299883 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637905621 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_511191 |
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| Protein GI | 89055740 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.332208 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.244414 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTCTG ATCTGCGTCA GATCCGCTAT TTCGTGGCCA CGGCGGAGGA GCTTCACTTT
CGCCGGGCCG CTGACCGTCT GGGCATCGCG CAACCGGCGC TGAGCCGCGC GATCCAGGCG
TTGGAGGCCG AGTTGGACGT GGCGCTGTTT GTGCGTACGA ACCGCTCCGT CCAGATCACC
ACGGCGGGTC GCGTGTTTCT CGACGGCGCG CGGGAAATTC TGACCCTGAC CGAGCGTATG
TTGGAAGAAA CCCGCACCGC CCATGACGGG CGCATGGGCG CGTTGCGCAT CGGCTATACC
GACTTCGCCA TCGCCGGAGA GCTGCCGAGC CTGCTGAAGC ACTTTCAGGA ACGCCACCCG
CGCGTGACCC TGAAGCCGCA GCACGGCGTC ACGCAGACCC AAATCCGGCT GTTGGAGGAG
GGCAAGCTGG ATCTGGGCTT TGTCACCGGT CCCATCGTGC GCGACGGCTT TGACCAGCGG
GTCGTCCAAT CCGAAGCACT GCAAGCCGTT GTCCCCGACA GCCACCCCTT TGCCGGGCGC
GCAACCCTGT CCATCGCGGA CCTGGCGGAG GAGGATTTTG TCCACGGCAG TTCCAGGGAT
TGGCAACATT TCTACGACTA TCTCTTGCCG ATGTGTCGCC GTGCCGGATT CTCGCCCCGG
ATCGTGCAGG AGGCCTTCAA CACCGCCGGT ATCCTTGGCC TCGTGTCCTG TGGGATGGGC
GTCACGGTGC TGACCGAACG GGTCTGTTCG GCCCTTGGTC CGGGGTTGGT CGCGATCCCG
ATCACGGACG CGGACGAACG CCTGGTGACT TCCGCCATTT GGCGCAAGGA CCACCTGTCT
GGGCCCGCGC GACACTTCGT AGAGGATCTC TGTGCGCGGC CGCCGCTTCC CTAA
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| Protein sequence | MRSDLRQIRY FVATAEELHF RRAADRLGIA QPALSRAIQA LEAELDVALF VRTNRSVQIT
TAGRVFLDGA REILTLTERM LEETRTAHDG RMGALRIGYT DFAIAGELPS LLKHFQERHP
RVTLKPQHGV TQTQIRLLEE GKLDLGFVTG PIVRDGFDQR VVQSEALQAV VPDSHPFAGR
ATLSIADLAE EDFVHGSSRD WQHFYDYLLP MCRRAGFSPR IVQEAFNTAG ILGLVSCGMG
VTVLTERVCS ALGPGLVAIP ITDADERLVT SAIWRKDHLS GPARHFVEDL CARPPLP
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