| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3245 |
|---|
| Symbol | |
|---|
| ID | 3935717 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 3294400 |
|---|
| End bp | 3296004 |
|---|
| Gene Length | 1605 bp |
|---|
| Protein Length | 534 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637905617 |
|---|
| Product | dihydroorotase |
|---|
| Protein accession | YP_511187 |
|---|
| Protein GI | 89055736 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3653] N-acyl-D-aspartate/D-glutamate deacylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.325053 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0340031 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGATC TGGTCCTGAA GGGTGGCGAG GTCTTTGACG GATCAGGCGA CGCCGGACGC
GTTGCCGATG TGGCCGTGAA GGATGGGCGC ATTGTGGACG TGGGGGACGT GCCCGTTGAG
GACGCGGCAG AGGTGATAGA TGTCTCGGGC CTTGCCGTGT CACCGGGCTT CATCGACATG
CACACACATT CCGATTTCAC GCTGATCGCC GATGGGCGCG CGGAAAGTCA GGTCCATCAG
GGCGTGACCA CCGAAGTGAT CGGCCAATGC GGCATCTCCT GTGCGCCGGT CTGTTCCCAC
GCCGCGATCC GGCAGGTGGC GCCGTGGTTC ACCGAGAAGG CAAAGCACAA GAAATGGCTG
GGGTTCGGCG AATATCTGGA CGTTTTGGAT GACACGCCAT TGGGCGTGAA CGTCGTGGCC
TTCGTGGGCC ACGGTACCAT CCACCGTGCG ATCCTGAGTG GCGAGATGCA CGCGGGAGAG
CCGGAGGATG TCGCCAAGAT GGCCAGGCTG GTGGATCAAT GCATGGAAGA GGGGGCCGGG
GGCTTTTCCA GCGGGTTGGA ATACTTCCCC GGAAGCCTTG CCGCCCCCGA TCACCTGGTC
CCGATGGTTG AGGTTGCGGC CAAATACGGA CGCCTCTACG CCACCCATGT GCGCAACCGT
GACACCGAAT ATGACCTTGG GTTCACCGAA GCCATGTCCA CGGCGCGGCA AGCAGGCGCA
CGGCTGCAAA TCAGCCATAT CCAGCCCAAA TTCGGCGCGC CGGGCCATGC GATGGAACAC
ACGCTGGAGA TGATCGACAT CGCCCGGACA CATGACGGGG ACATTGCATT TGACGTGATC
CCGCACGATT GGAACCACAC GCTGATGGCC GCGATCCTAC CCAAATGGGC GCAGGCAGGC
AGCATTGACG ATGTGCTGAA ACGGCTGGCA GATCCCGAGA TGCGCGAGAA GATCAAGGCC
AACCCCAAGC CCATGTGGTT GATCGTGAAA GCCCGCAAGT GGAGCGATAT CATCCTGCTC
AATGCGACCG TCAACAAGGA TATCGTGGGC GCGAATTTTG AGGAAATCGG GCGGATGCGC
GGCGTCGATC CTTATGACGC GGTGCTCGAC ATTCTGTTAG AGGAGGGTGA CGCGCTGATG
GCCGTCATGT GGTCGTCGAA ATCGTTCCGC AATGACGATG TGGACCTGTG CCTGCAACAG
CCGGAATGCG CCGTGATCTC GGACACGGTT GCGATTGCCA ATGACGGGGT GCTGTCCGAT
CATATCGGCT CATTGTCCGG CTACGGATGG GCGGCGCGGT TCTTGCAACA TTACGTGCGT
GACCGGGGCG TTTTGAGCCT TGCCGAGGGG CTGGCCAAAT TGACCTCGAT CCCTGCTGAC
CGTCTTGGCC TGAAAGAGCG TGGCAGGCTT ACCCCCGGTT ATCACGCGGA TATCTGCGTG
TTTGATCCGG CCAACATCGC CTCCAATGTC ACGGCGCGCA ATCCGCGACG CTACGCCACC
GGCATCGCCC ATGTGCTGGT CAACGGTGCG CTGTCGATGC GCAACGGGGT GCGGACCGAT
AGCAACGCAG GACGTGTGGT GCGTGATTTT CAGGTGTTGG GATAG
|
|---|
| Protein sequence | MFDLVLKGGE VFDGSGDAGR VADVAVKDGR IVDVGDVPVE DAAEVIDVSG LAVSPGFIDM
HTHSDFTLIA DGRAESQVHQ GVTTEVIGQC GISCAPVCSH AAIRQVAPWF TEKAKHKKWL
GFGEYLDVLD DTPLGVNVVA FVGHGTIHRA ILSGEMHAGE PEDVAKMARL VDQCMEEGAG
GFSSGLEYFP GSLAAPDHLV PMVEVAAKYG RLYATHVRNR DTEYDLGFTE AMSTARQAGA
RLQISHIQPK FGAPGHAMEH TLEMIDIART HDGDIAFDVI PHDWNHTLMA AILPKWAQAG
SIDDVLKRLA DPEMREKIKA NPKPMWLIVK ARKWSDIILL NATVNKDIVG ANFEEIGRMR
GVDPYDAVLD ILLEEGDALM AVMWSSKSFR NDDVDLCLQQ PECAVISDTV AIANDGVLSD
HIGSLSGYGW AARFLQHYVR DRGVLSLAEG LAKLTSIPAD RLGLKERGRL TPGYHADICV
FDPANIASNV TARNPRRYAT GIAHVLVNGA LSMRNGVRTD SNAGRVVRDF QVLG
|
|---|
| |