| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3243 |
|---|
| Symbol | |
|---|
| ID | 3935715 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 3292082 |
|---|
| End bp | 3292846 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637905615 |
|---|
| Product | transglutaminase-like |
|---|
| Protein accession | YP_511185 |
|---|
| Protein GI | 89055734 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.424539 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.140408 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCTTG ACATCGAAGT GGACCTCGAC GGCACGCTGA TCCCCGGCGA TGCGGCTTTG
CTGATGATAG AAATGGCCTC GGGCGCAGGG CAGCGGGTTG TGACCTCGGA CCTCGCCGTC
AGTCAAGGTA TGCTGAAACG GCTGGACGGC ACGGCCATGG TCTGGGTCGA TGCGCCGGAG
GGCGCGCTGT CTCTGCGCTA CCGGGCGACC GTGGAGATGT CCGGGCCCGC TGCGGCGCTC
GACCAACTTG CATCCGCACC GTTGCAGGCG CTGCCGGGCG AGGTGCTGCC CTATCTGCGT
CCGTCCCGGT ATTGTCAGGC CGACCTTTTC ACCGACTTTA CTGAGCAGCA ATTCGGCACG
CTGGACGGCG GCTTGAAGAT CCAGGCGATC CGCAACTGGA TCGCGGAGCA TGTGACATAC
ACGTCGGGCA GCTCAGACGG CGCGACAACG GCGGTTGAGA CCTTCGCCGC CCTCAAAGGC
GTCTGTCGGG ATTTCGCGCA TCTCACATGC ACGCTTGCGC GCGCGTCGGG CATTCCGGCC
CGCTACGTGT CTGTCTACGG CGCAGACGTC GCCCCACAGG ATTTTCACGC GATAGCCGAG
GTCTGGCTGG ACGGAGGCTG GCATCCTGTG GACGCCACCG ACATGGGCGC ACCGCACGAG
ATGGCGGTGA TCGCAACGGG TCGCGACGCC GCAGATACGG CCTTCATGGA GACCGCCGGT
TGGGCGTCGC TGACCCGGCA AAACGTGCGG GTGCGTCGGG TCTGA
|
|---|
| Protein sequence | MQLDIEVDLD GTLIPGDAAL LMIEMASGAG QRVVTSDLAV SQGMLKRLDG TAMVWVDAPE
GALSLRYRAT VEMSGPAAAL DQLASAPLQA LPGEVLPYLR PSRYCQADLF TDFTEQQFGT
LDGGLKIQAI RNWIAEHVTY TSGSSDGATT AVETFAALKG VCRDFAHLTC TLARASGIPA
RYVSVYGADV APQDFHAIAE VWLDGGWHPV DATDMGAPHE MAVIATGRDA ADTAFMETAG
WASLTRQNVR VRRV
|
|---|
| |