| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3239 |
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| Symbol | |
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| ID | 3935711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3287293 |
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| End bp | 3288705 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637905611 |
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| Product | hypothetical protein |
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| Protein accession | YP_511181 |
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| Protein GI | 89055730 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.544846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.375824 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAT CGCCCGATCT GCAAGCCGTC CTCGACTATG CGGACGCGCA CATGAACGAC
AGCCTTGCGC GGCTATTTGA CCTCGTGCGC ATACCGTCCG TTTCGACAGT TCCGGCCCAT
GCGGGTGACT GTCGCGCTGC GGCCCAATGG TTGTCTGATC AGTTGAACGA TCTGGGTTTT
GATGCCTCGG TCCGCCCGAC CGGCGGCCAC CCGATGGTCG TGGCGCATCA GACCGACGCG
GATGGTCCCC ACGTGTTATT TTACGGCCAT TACGACGTTC AGCCCGTCGT TCCGCTGGAG
CTGTGGAAGA CCGATCCGTT TGAGCCAACG CTTGAACCGC AGCCAAACGG CGACACCCAC
ATCACCGGGC GCGGGGCCTC CGACGACAAG GGCCAGCTGC TGACCTTCAT CGAGGCGTGC
CGCGCGTGGA AAGCGGTCAC CGGACGCCTG CCCATCAAGG TCTCCATGCT GTTTGAGGGG
GAGGAGGAGT CCGGCTCCCA AAGCCTCGGG CCGTTTTTGG AGCAGACGGC AGAGGAGCTG
CGCGCAGACG TCATGATGGT CTGTGACACC GATATGTGGG ACCGTGACAC GCCCGCGATC
ACGACAATGC TACGCGGTTT GGTGGGGGAG GAATTCACCA TCACAACCGC AGACCGGGAC
TTGCATTCGG GCATGTTTGG AAACGCCGCA CGCAATGCGT TGCAGGTGGC GTCCGATGCC
ATAGCGGGTC TGCGCGGGCC CGACGGCGGC GTGACATTGC CCGGATTCTA CGACGGCGTT
GAAGATCTTG CACCCGAGAT CAAGGCGCAG TGGAAGAGCC TGCCGTTCGA CCAGGAGGGT
TTCCTGTCTG ACGTAGGCCT CAGCCTGCCA GCAGGAGAGG ACGCCTATTC CATCATGGAG
CAGATCTGGG CCCGACCCAG TTGCGAAATC CACGGCGTGA TCGGCGGCTA CACGGACGAG
GGCTTCAAGA CAGTCATTCC AGCGAAAGCC ACGGCCAAGG TCTCGTTCCG ACTGGTGGCG
GGCCAGGATC CCGCGCGCAT CCGCGAGGCG TTCCGCGCCC ATATCCGCGC CTATGTGCCC
AAGGATTGCT CGGTCGAATT CACGTCCCAT GGGGCGAGCC CGGCCTTGTC CCTGCCGCTC
GACAGCCCCT ACCTGACAGC GACCCGCGAA GCGCTGAGCC AGGAATGGGG CACGGAGGCT
GCGCTGGCCG GAACCGGCGG ATCGATCCCC ATCGTCGGCG AATTCAAACG TCAATTGGGG
ATGGATACGC TGCTGGTGGG CTTTGCCCGC TTCGACAACC GCATCCACAG CCCGAACGAG
AAGTACGACC TGTCCAGCTT CACCGGCGGC ATCCGGTCGT TCGTCCGCGT GCTGGCGGCC
CTTTCTGAGA TTGAGGCGGC CGCTGCCCCA TGA
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| Protein sequence | MTQSPDLQAV LDYADAHMND SLARLFDLVR IPSVSTVPAH AGDCRAAAQW LSDQLNDLGF
DASVRPTGGH PMVVAHQTDA DGPHVLFYGH YDVQPVVPLE LWKTDPFEPT LEPQPNGDTH
ITGRGASDDK GQLLTFIEAC RAWKAVTGRL PIKVSMLFEG EEESGSQSLG PFLEQTAEEL
RADVMMVCDT DMWDRDTPAI TTMLRGLVGE EFTITTADRD LHSGMFGNAA RNALQVASDA
IAGLRGPDGG VTLPGFYDGV EDLAPEIKAQ WKSLPFDQEG FLSDVGLSLP AGEDAYSIME
QIWARPSCEI HGVIGGYTDE GFKTVIPAKA TAKVSFRLVA GQDPARIREA FRAHIRAYVP
KDCSVEFTSH GASPALSLPL DSPYLTATRE ALSQEWGTEA ALAGTGGSIP IVGEFKRQLG
MDTLLVGFAR FDNRIHSPNE KYDLSSFTGG IRSFVRVLAA LSEIEAAAAP
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