| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3238 |
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| Symbol | |
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| ID | 3935710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3285954 |
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| End bp | 3287288 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637905610 |
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| Product | amidohydrolase |
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| Protein accession | YP_511180 |
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| Protein GI | 89055729 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.837706 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACGC TCCTCACCAA CGCCTGGATC CTCGCGGTCG ATGACGCGAT GTCTGAATAT
CGCGACGGCT GGTTGTTGAT AGAAAACAGC AAGATCGCAG CCCTTGGCGA CGGCCCGCCG
CCGGATACAA AGGGCGCAGA ATTCTGCAAT ATGGGCGGTG ACATCGTTAT GCCCGGGATG
GTGAACACCC ATTGCCACAT GGCGATGTCG CTGTTCCGAG GCTTGGGTGA GGACGTGGAT
GATCGCCTTT ACCGCTACAT GCTGCCGCTG GAACGCAAAT TCGTCTCGGC CGACATGGTT
CGCGTCGGCT CCACCCTGTC GGCGCTGGAG ATGATCATGG GCGGCGTCAC CTGCGTCGCG
GACATGTACT ACCATGAAAC GCAGGTCGCG GATGTCATCG CGACCTCAGG CATGCGCGGC
GTCGTGGGGC AAACGCTCGC CAATTTTGAC CCGCCCGACC ACACCAGTTT CGATGAGGGG
TTTGCGCTGT GCGACGCCTT GGTGGAGCAT TGCGCGGGGA TGCCGCGCGT GACTGCCTCC
ATCGCGCCGC ACGCGCCCTA TTCGACGGGC ATGGACGTGA TGGAGCGGGT GGCCGGCTGG
CACGCCGATC ACCCGGAAAC CCGTATCCAG ATTCATCTGG CCGAGACGGA GGCCGAGGTC
GCCTGGGCCC ATGACACCCA CGGCATGACC ACCACGGCCG TCTGCGATGC AGCAGGCCTG
TTGAAGCCCG GCACAATCGC CGCCCATTGC CTGCTGATCA GTGACGCCGA TATCGACATC
CTCGCCCGAA CCGATACCCG CGTCGCCCAC AACGCGCGCT CCAACGGCAA GGCCGGGCGC
GGCATGGCGC GGGTGGAGGA TATGCGCCGC GCGGGCATCC CCGTGGGCCT CGCCACCGAT
GGCCCGATGA GCGGTAATAC TCTTGATCTC TTCTCCCAGT TCGGCGTCGC CTCGATCTTC
GCCAAGGTTC TTGGCGGGTC CCGCAAGCCG CTGCCCACCC GCGACGTGAT CCGCATGGCC
ACGATTGAGG GCGCGCGCGT GCTGGGGCTG GAGGCGCAGA CCGGCTCGCT AGAGGTCGGC
AAGGCCGCCG ATCTGATCCG CATCGACCTA TCCGCGCCGC GTATGCAGCC GATCTATGAT
CCCTACTCGG TCCTCGTTTT TGCCACGATG CCCACAGATG TGCGCGATGT CATGGTCGAT
GGCATCTGGC TGATGCGCGA CCGGACGATT GAAACGCTGG AACCCGCGCG CGTACTGGCC
GATGCCAATC AGGTGGCCGG ACAATTCCGC ACTGAGATTG CCGCCATAGA TGCCGCGATG
GCTGTCAAAG GATGA
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| Protein sequence | MKTLLTNAWI LAVDDAMSEY RDGWLLIENS KIAALGDGPP PDTKGAEFCN MGGDIVMPGM
VNTHCHMAMS LFRGLGEDVD DRLYRYMLPL ERKFVSADMV RVGSTLSALE MIMGGVTCVA
DMYYHETQVA DVIATSGMRG VVGQTLANFD PPDHTSFDEG FALCDALVEH CAGMPRVTAS
IAPHAPYSTG MDVMERVAGW HADHPETRIQ IHLAETEAEV AWAHDTHGMT TTAVCDAAGL
LKPGTIAAHC LLISDADIDI LARTDTRVAH NARSNGKAGR GMARVEDMRR AGIPVGLATD
GPMSGNTLDL FSQFGVASIF AKVLGGSRKP LPTRDVIRMA TIEGARVLGL EAQTGSLEVG
KAADLIRIDL SAPRMQPIYD PYSVLVFATM PTDVRDVMVD GIWLMRDRTI ETLEPARVLA
DANQVAGQFR TEIAAIDAAM AVKG
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