| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3237 |
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| Symbol | |
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| ID | 3935709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3284896 |
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| End bp | 3285957 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637905609 |
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| Product | ABC transporter related |
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| Protein accession | YP_511179 |
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| Protein GI | 89055728 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.543822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.547453 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTAC CCCTATCCAT CGATCAGATC ACGGCCCACT ACGGGACCAC CAAGGTGCTG
GAGGATCTGT CGCTGTCCGT GGCGGATGGA GAGTTGGTGT CGCTTCTGGG CGCGTCGGGC
TGCGGCAAGA CCACGACCCT GCGGCTGGTG GCGGGTTTCA TGCAGCCCAC CAGCGGCACG
ATCCGGTTGG GCGACACGGA TCTAACCCGC CTGCCCGCCC ATGGCCGCGA CATCGGGCTG
GTGTTTCAAA GCTACGCTCT GTTTCCGCAT ATGTCGGTGC AGGACAACGT GGCCTTCGGG
TTGAAACAAC GCCGCGTGCC GGGGGCGGAG AAGACGCGCC GCGCGACCGA GATGTTGGAG
CGCGTGGGTC TGGAGCATCT GGCGACACGG CTCCCCGGAG AGTTGTCGGG CGGCCAAAAA
CAACGCGTGG CATTGGCCCG CGCCTTGGTG ATCGAGCCGC CACTTCTGAT GTTCGATGAA
CCGCTGTCGA ACCTCGATGC AAAACTGCGC GTCGATATGC GGGTAGAGAT CCGTCAATTG
CAGCGCGCCA ACGGGACGAC TGCGCTTTAC GTGACCCACG ACCAGGAAGA GGCGTTCTCC
ATCTCGGACC GTGTTGCGAT CATGAACCAG GGTCGGATCA TGCAGCTGGA TACGCCCGAA
ACCCTGTATC AACGCCCCGC AAATGCCTTC GTGGCGCGGT TCGTGGGCTT CGATAACCTG
ATCGAGTTGA CGGTCGTGAG CCGTGACGGC GCGACCGTGC GGGCGCAAAC AGGGGACGGC
GCACTGATAG ACCTGTCTCA GGATCGGCTG GGAGACATCC CTGATGACTT CATCCTCGCC
ACGCGCGCCG ATGGGCTGAC CGTCACCGAT GCGCCCGATG CCCAAGGTCT GCCTGCGACC
CTTGGGCTGC GCACTTATCT GGGCCGCGCT TATCAGTATC GGTGCGAGGC GGGCGCCGCG
CATCTGGTGG CCAACGGCTC CCTCGCGACC CCGTTTGAGC CCGGAATGCG GGCCACGCTG
GTCCCCAACC CGGACCAATG TGCGATCCTG GCTCCGGAAT GA
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| Protein sequence | MTLPLSIDQI TAHYGTTKVL EDLSLSVADG ELVSLLGASG CGKTTTLRLV AGFMQPTSGT
IRLGDTDLTR LPAHGRDIGL VFQSYALFPH MSVQDNVAFG LKQRRVPGAE KTRRATEMLE
RVGLEHLATR LPGELSGGQK QRVALARALV IEPPLLMFDE PLSNLDAKLR VDMRVEIRQL
QRANGTTALY VTHDQEEAFS ISDRVAIMNQ GRIMQLDTPE TLYQRPANAF VARFVGFDNL
IELTVVSRDG ATVRAQTGDG ALIDLSQDRL GDIPDDFILA TRADGLTVTD APDAQGLPAT
LGLRTYLGRA YQYRCEAGAA HLVANGSLAT PFEPGMRATL VPNPDQCAIL APE
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