| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3235 |
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| Symbol | |
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| ID | 3935707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3283266 |
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| End bp | 3284090 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637905607 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_511177 |
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| Protein GI | 89055726 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0620959 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.806351 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCC TTGCAGGCTG GATGTTGTCG TCACCTGCGA CCCTTGCGGT GTCGCTGTTT
CTGATCATTC CGGTGGCCGC GACGATCAGC GCAACGTTCA CCTCGCCCGG CGGCACCTTC
GCGCCTTACG GCGAGTTTTT CGCGTCGGGC TTCCAGCGCA CCGTTCTGTG GCGCACGTTT
GAAGTAGCCG CGATCACCAC TGTGATCTCG CTGATCCTGG GGCTGCTTAC CGCCTATGTC
GTCTCCCGCA GCCCGCCCTG GATGAAGTCG GTTCTGGTCA TTCTGGCGGT CTTCCCGCTG
CTGACCGGGG TGGTCGTGCG CTCCTTTGCC TGGCTGATCA TTCTTGGACG CAACGGCGTG
CTCAACAACA CGCTGGAATG GTTGGGCGTG ATCGAGCGGC CCATGGCGCT GCTCTACAGC
CAGACCTCTG TGGTCATCGC GCTGATCTAC ATCTTCATTC CCCTGATGAT CCTGGTCCTG
ATCGGGGTGT TGGAGAACAT ACCCGACGAT CTGCTCCAAG CCTCCTCCTC CCTCGGGGCG
TCGCCCACGG CCACCTTTCT GCAGATCACC CTGCCTCTGG CCACGCCCGG CCTGATCGTG
GGGGCGGTGC TGGTCTTCAC GGCCAGTTTC ACCTCCTACG CCACACCGCA CCTTCTCGGC
GGCACGCGGC AGATGATGAT GGGCACGTTC CTGCACCAAC GGGCCATGGT TTCCTTCGAC
TGGGTCAGTG CGTCGACCGT GGCGGCGATC ATGGTCGTGG TGATCGTCAC AACCGTGCTG
GTCATGACGC GCATCGCCAA GCGCCTGAAC CCGATGGCAT CGTGA
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| Protein sequence | MKRLAGWMLS SPATLAVSLF LIIPVAATIS ATFTSPGGTF APYGEFFASG FQRTVLWRTF
EVAAITTVIS LILGLLTAYV VSRSPPWMKS VLVILAVFPL LTGVVVRSFA WLIILGRNGV
LNNTLEWLGV IERPMALLYS QTSVVIALIY IFIPLMILVL IGVLENIPDD LLQASSSLGA
SPTATFLQIT LPLATPGLIV GAVLVFTASF TSYATPHLLG GTRQMMMGTF LHQRAMVSFD
WVSASTVAAI MVVVIVTTVL VMTRIAKRLN PMAS
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