| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3214 |
|---|
| Symbol | |
|---|
| ID | 3935686 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 3258721 |
|---|
| End bp | 3259038 |
|---|
| Gene Length | 318 bp |
|---|
| Protein Length | 105 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637905586 |
|---|
| Product | ISPsy22, transposase truncated |
|---|
| Protein accession | YP_511156 |
|---|
| Protein GI | 89055705 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3666] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATACTGG GACCCAGGCA GGAAGCGCAA CCGGCGCTGT TCTACGAGTT CTCTTTGGAC
GATCATGTGC CGCAAGACCA TTTGCTGCGC TCGGTTGATC GGTTCGTCGA TCTGAGCGAC
ATCCGCCAAT ATTTTGCTGA GCTTTATAGT CACACAGGTC GTCCATCGAT TGATCCCGAA
CTGCTGATAC GCATGCTGTT GGTGGGCTAT TGCTTCGGCA TCCGGTCTGA GCGCCGGTTG
TGCGAAAGGG CCCGCGTTCT TCAGCTATTC CACCAATTAC CTGATCGACA CCGATCACAG
CGTGATCGTG GACGTTGA
|
|---|
| Protein sequence | MILGPRQEAQ PALFYEFSLD DHVPQDHLLR SVDRFVDLSD IRQYFAELYS HTGRPSIDPE
LLIRMLLVGY CFGIRSERRL CERARVLQLF HQLPDRHRSQ RDRGR
|
|---|
| |