Gene Jann_3205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3205 
Symbol 
ID3935676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3248214 
End bp3250457 
Gene Length2244 bp 
Protein Length747 aa 
Translation table11 
GC content64% 
IMG OID637905576 
Productphosphoenolpyruvate-protein phosphotransferase PtsP 
Protein accessionYP_511147 
Protein GI89055696 
COG category[T] Signal transduction mechanisms 
COG ID[COG3605] Signal transduction protein containing GAF and PtsI domains 
TIGRFAM ID[TIGR01417] phosphoenolpyruvate-protein phosphotransferase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.895136 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGA GTTTGGAAAC AGAAAGCCGC AAGCTGCTCT CGCGCTTGCA GGCGGTCATG 
GCTGAGGCTG CGGCGGGTCA GGAACGGCTG GACCGCATCA CCCATCTGAT CGCGGATTCG
ATGGGAACGG AAGTGTGCTC CATCTACCTG CTCCGCGATG CCGAGACGTT GGAATTGTGT
GCGACCCAGG GCCTGGCGCC CGAGGCTGTG CACGTCACGC GAATGCGGAT CGGAGAGGGC
CTTGTGGGCC GCGTTGCGCT GCGGGCGCGC CCGTTCAACA CCGCCAATGC CCCGGCCGAG
AAGGGCTTCC GCTACATGGC CGAGACCGGG GAAGAGGCGT TTTCCTCCTT CCTGGGCGTG
CCGATCCAGC GGCTGGGAGA ACGTCTGGGC GTGCTGGTCG TTCAGTCCAA GGACGAGCGC
GAGTATTCGG AGGACGAGGT CTACGCCCTT GAAGTCGTGG CCATGGTTCT GGCCGAGATG
ACAGAACTTG GAGCCTTCGT GGGCGAAGGG GCCGCCCTTT CGGCACGCCA CACCAACCAG
TTCATGTTTC GCGGCGGCGT GGCCCAGGAA GGGGCCGCGA TGGGGCATGT CTGGCTCCAT
GAGCCGCGCG TCGTCGTCAC CAACCCCGTC GCCGATGACC CGGCGGTCGA AAGGGTCCGT
CTGACCGAGG CTATCGATCA GCTCCGCACC GATATCGACC AGATGCTGAC CAATGTGTCG
CAGGGCGACA AGGATCAGGC CGAGGTGTTG GAGGCCTACC GCATGTTCGC CCGCTCTCGG
GGCTGGATGC GCCGGATGGA AGAGGACATC GAGCGGGGGC TGTCGGCAGA GGCGGCCGTG
GAGAAAGAAC AATCCTCGGC CCGCGCCCGG ATGGAAACGG TGCCCGACGC CTACCTGCGC
GAACGCCTCC ACGACCTTGA TGATCTGTCC AACCGTCTGC TGCGTCTTCT GACTGGCCAA
GGCCGGGACA CGGGCGCTGA GATGCCGATG GACCCGGTGC TTGTGGCCCG CAACATCGGC
CCCGGAGAGC TGCTGGATTA TGGTCGCAGT CTCAAAGGTG TCGTGTTGGA AGAAGGATCG
GTGGGCTCGC ACGCTGCGAT TGTGGCCCGC GCGCTGGCGA TCCCCTTGGT GATCCATGCC
AAACGCATCA GCACGGAGGC GCTGAACGGC GACCCCATTC TGGTCGATGG CGACCAGGGG
ATCGTGCACT TGCGGCCCGA GGATACCGTC GCCTCTGCCT TCCGGGACAA ACTGGCGATG
CAGGCCGAAG CGCAGGAGCG CTATGCCTCG ATCCGCGACA AACCCGCGAC ATCGCTCTGC
GGTACGACCG TGTCGCTGCA AATGAACGCG GGCCTGATGG CGGATCTGCC GTCGCTGCCC
TCGTCGGGTG CGGAGGGGGT GGGTCTTTTC CGGACGGAGT TGCAATTCCT CACCCGCGCC
CGCGTACCGC GCCGGGGCGA ATTGGCGCGG CTCTACGCCA AGGTGATGGA TGCTGCTGGC
GACAAGCGCG TGGTGTTCCG GACCCTCGAC ATCGGGTCGG ACAAGGTGCT GCCCTACATG
AAGCCCCAGG ATGAGCCGAA CCCGGCCCTT GGCTGGCGCG CAATCCGTGT GGGTCTGGAC
AAACCCGGCG TCATGCGGAT GCAGCTGCAA GCGCTGATCC GCGCCGCGAA CGGCAGGCCC
TTGTCCGTGA TGTTCCCCTT CATTGCCCAG TTCGATGAAT TCACAGCCGC GCGCGATCAC
CTGATGCGCG AGATGGACCG CGAGGCCGCC TTGGGCCATG TCCTGCCGTC TGACTTGCAA
ATTGGCGCGA TGCTGGAAAC GCCATCGCTG GCATTTGCCC CGCATCAGTT TTTTGAACTG
GCAGATTTCA TCTCCATCGG GGGCAATGAT CTCAAGCAGT TCTTCTTTGC CGCTGACCGG
GAAAATGAGC GCGTGCGCCG TCGCTATGAC ACGCTGAATG TCTCGTTCCT GACATTCATG
GAGCAGATCG TGCACCGCTG TGCGGAGACC GACACACCGC TGAGCTTCTG CGGAGAAGAC
GCAGGTCGTC CCGTGGAAGC AGTTTGTTTC GCTGCCATGG GATTGCGCAA CCTGTCGATG
CGGCCCGCGT CAATCGGGCC GGTGAAGTCG CTTCTGCGGC GGGTGGATCT GCGCGAGGCC
CGGGGGGTGA TCACCGAGGC ACGCGGCGCG GGCGCGCAAT CAGTCCGCGG GGCAGTGATG
GATTGGCTGA AGCGCCAGGC CTGA
 
Protein sequence
MTESLETESR KLLSRLQAVM AEAAAGQERL DRITHLIADS MGTEVCSIYL LRDAETLELC 
ATQGLAPEAV HVTRMRIGEG LVGRVALRAR PFNTANAPAE KGFRYMAETG EEAFSSFLGV
PIQRLGERLG VLVVQSKDER EYSEDEVYAL EVVAMVLAEM TELGAFVGEG AALSARHTNQ
FMFRGGVAQE GAAMGHVWLH EPRVVVTNPV ADDPAVERVR LTEAIDQLRT DIDQMLTNVS
QGDKDQAEVL EAYRMFARSR GWMRRMEEDI ERGLSAEAAV EKEQSSARAR METVPDAYLR
ERLHDLDDLS NRLLRLLTGQ GRDTGAEMPM DPVLVARNIG PGELLDYGRS LKGVVLEEGS
VGSHAAIVAR ALAIPLVIHA KRISTEALNG DPILVDGDQG IVHLRPEDTV ASAFRDKLAM
QAEAQERYAS IRDKPATSLC GTTVSLQMNA GLMADLPSLP SSGAEGVGLF RTELQFLTRA
RVPRRGELAR LYAKVMDAAG DKRVVFRTLD IGSDKVLPYM KPQDEPNPAL GWRAIRVGLD
KPGVMRMQLQ ALIRAANGRP LSVMFPFIAQ FDEFTAARDH LMREMDREAA LGHVLPSDLQ
IGAMLETPSL AFAPHQFFEL ADFISIGGND LKQFFFAADR ENERVRRRYD TLNVSFLTFM
EQIVHRCAET DTPLSFCGED AGRPVEAVCF AAMGLRNLSM RPASIGPVKS LLRRVDLREA
RGVITEARGA GAQSVRGAVM DWLKRQA