Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3205 |
Symbol | |
ID | 3935676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 3248214 |
End bp | 3250457 |
Gene Length | 2244 bp |
Protein Length | 747 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637905576 |
Product | phosphoenolpyruvate-protein phosphotransferase PtsP |
Protein accession | YP_511147 |
Protein GI | 89055696 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3605] Signal transduction protein containing GAF and PtsI domains |
TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.895136 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGAGA GTTTGGAAAC AGAAAGCCGC AAGCTGCTCT CGCGCTTGCA GGCGGTCATG GCTGAGGCTG CGGCGGGTCA GGAACGGCTG GACCGCATCA CCCATCTGAT CGCGGATTCG ATGGGAACGG AAGTGTGCTC CATCTACCTG CTCCGCGATG CCGAGACGTT GGAATTGTGT GCGACCCAGG GCCTGGCGCC CGAGGCTGTG CACGTCACGC GAATGCGGAT CGGAGAGGGC CTTGTGGGCC GCGTTGCGCT GCGGGCGCGC CCGTTCAACA CCGCCAATGC CCCGGCCGAG AAGGGCTTCC GCTACATGGC CGAGACCGGG GAAGAGGCGT TTTCCTCCTT CCTGGGCGTG CCGATCCAGC GGCTGGGAGA ACGTCTGGGC GTGCTGGTCG TTCAGTCCAA GGACGAGCGC GAGTATTCGG AGGACGAGGT CTACGCCCTT GAAGTCGTGG CCATGGTTCT GGCCGAGATG ACAGAACTTG GAGCCTTCGT GGGCGAAGGG GCCGCCCTTT CGGCACGCCA CACCAACCAG TTCATGTTTC GCGGCGGCGT GGCCCAGGAA GGGGCCGCGA TGGGGCATGT CTGGCTCCAT GAGCCGCGCG TCGTCGTCAC CAACCCCGTC GCCGATGACC CGGCGGTCGA AAGGGTCCGT CTGACCGAGG CTATCGATCA GCTCCGCACC GATATCGACC AGATGCTGAC CAATGTGTCG CAGGGCGACA AGGATCAGGC CGAGGTGTTG GAGGCCTACC GCATGTTCGC CCGCTCTCGG GGCTGGATGC GCCGGATGGA AGAGGACATC GAGCGGGGGC TGTCGGCAGA GGCGGCCGTG GAGAAAGAAC AATCCTCGGC CCGCGCCCGG ATGGAAACGG TGCCCGACGC CTACCTGCGC GAACGCCTCC ACGACCTTGA TGATCTGTCC AACCGTCTGC TGCGTCTTCT GACTGGCCAA GGCCGGGACA CGGGCGCTGA GATGCCGATG GACCCGGTGC TTGTGGCCCG CAACATCGGC CCCGGAGAGC TGCTGGATTA TGGTCGCAGT CTCAAAGGTG TCGTGTTGGA AGAAGGATCG GTGGGCTCGC ACGCTGCGAT TGTGGCCCGC GCGCTGGCGA TCCCCTTGGT GATCCATGCC AAACGCATCA GCACGGAGGC GCTGAACGGC GACCCCATTC TGGTCGATGG CGACCAGGGG ATCGTGCACT TGCGGCCCGA GGATACCGTC GCCTCTGCCT TCCGGGACAA ACTGGCGATG CAGGCCGAAG CGCAGGAGCG CTATGCCTCG ATCCGCGACA AACCCGCGAC ATCGCTCTGC GGTACGACCG TGTCGCTGCA AATGAACGCG GGCCTGATGG CGGATCTGCC GTCGCTGCCC TCGTCGGGTG CGGAGGGGGT GGGTCTTTTC CGGACGGAGT TGCAATTCCT CACCCGCGCC CGCGTACCGC GCCGGGGCGA ATTGGCGCGG CTCTACGCCA AGGTGATGGA TGCTGCTGGC GACAAGCGCG TGGTGTTCCG GACCCTCGAC ATCGGGTCGG ACAAGGTGCT GCCCTACATG AAGCCCCAGG ATGAGCCGAA CCCGGCCCTT GGCTGGCGCG CAATCCGTGT GGGTCTGGAC AAACCCGGCG TCATGCGGAT GCAGCTGCAA GCGCTGATCC GCGCCGCGAA CGGCAGGCCC TTGTCCGTGA TGTTCCCCTT CATTGCCCAG TTCGATGAAT TCACAGCCGC GCGCGATCAC CTGATGCGCG AGATGGACCG CGAGGCCGCC TTGGGCCATG TCCTGCCGTC TGACTTGCAA ATTGGCGCGA TGCTGGAAAC GCCATCGCTG GCATTTGCCC CGCATCAGTT TTTTGAACTG GCAGATTTCA TCTCCATCGG GGGCAATGAT CTCAAGCAGT TCTTCTTTGC CGCTGACCGG GAAAATGAGC GCGTGCGCCG TCGCTATGAC ACGCTGAATG TCTCGTTCCT GACATTCATG GAGCAGATCG TGCACCGCTG TGCGGAGACC GACACACCGC TGAGCTTCTG CGGAGAAGAC GCAGGTCGTC CCGTGGAAGC AGTTTGTTTC GCTGCCATGG GATTGCGCAA CCTGTCGATG CGGCCCGCGT CAATCGGGCC GGTGAAGTCG CTTCTGCGGC GGGTGGATCT GCGCGAGGCC CGGGGGGTGA TCACCGAGGC ACGCGGCGCG GGCGCGCAAT CAGTCCGCGG GGCAGTGATG GATTGGCTGA AGCGCCAGGC CTGA
|
Protein sequence | MTESLETESR KLLSRLQAVM AEAAAGQERL DRITHLIADS MGTEVCSIYL LRDAETLELC ATQGLAPEAV HVTRMRIGEG LVGRVALRAR PFNTANAPAE KGFRYMAETG EEAFSSFLGV PIQRLGERLG VLVVQSKDER EYSEDEVYAL EVVAMVLAEM TELGAFVGEG AALSARHTNQ FMFRGGVAQE GAAMGHVWLH EPRVVVTNPV ADDPAVERVR LTEAIDQLRT DIDQMLTNVS QGDKDQAEVL EAYRMFARSR GWMRRMEEDI ERGLSAEAAV EKEQSSARAR METVPDAYLR ERLHDLDDLS NRLLRLLTGQ GRDTGAEMPM DPVLVARNIG PGELLDYGRS LKGVVLEEGS VGSHAAIVAR ALAIPLVIHA KRISTEALNG DPILVDGDQG IVHLRPEDTV ASAFRDKLAM QAEAQERYAS IRDKPATSLC GTTVSLQMNA GLMADLPSLP SSGAEGVGLF RTELQFLTRA RVPRRGELAR LYAKVMDAAG DKRVVFRTLD IGSDKVLPYM KPQDEPNPAL GWRAIRVGLD KPGVMRMQLQ ALIRAANGRP LSVMFPFIAQ FDEFTAARDH LMREMDREAA LGHVLPSDLQ IGAMLETPSL AFAPHQFFEL ADFISIGGND LKQFFFAADR ENERVRRRYD TLNVSFLTFM EQIVHRCAET DTPLSFCGED AGRPVEAVCF AAMGLRNLSM RPASIGPVKS LLRRVDLREA RGVITEARGA GAQSVRGAVM DWLKRQA
|
| |