| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3204 |
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| Symbol | |
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| ID | 3935675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3246358 |
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| End bp | 3247971 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637905575 |
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| Product | thiamine pyrophosphate enzyme-like TPP-binding |
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| Protein accession | YP_511146 |
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| Protein GI | 89055695 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGGTG AGATGCGCGC GGCAGATGCG GTGGCGGAGC GGCTTTATGA GGCCGGGTGC
CGCCATGCCT TCGGGATGCC GGGCGGTGAG GTGCTGACCA TCGTTGACGC GCTGGAGAAG
GCCGGGATCG CGTTTCATCT GGTCAAGCAT GAGAACGCGG GCGGGTTCAT CGGCGAAGGG
GTTCACCATG TGGACGGCGC GCCGGTGGTC CTTGTGGCGA CGGTGGGGCC GGGGCTGATG
AACGCGGTCA ATGTCGTGGC CAACGCCGAA CAGGACCGCG TGCCGATGGT GGTCCTGACC
GGCTGCCTCG ATGCCGATGA AGCGCTGACC TATACCCATC AGGTTCTGGA TCACCGGGCC
GTGCTGGACC CGATCACCAA GGCAACCTTC ACGCTCTCGG CGGCGGAGGC AGACACGATT
GCCGACAAGG CCGTGGCCAT CGCGATGGAG CGGCGCGCAG GTCCTGTCCT GATCGACGTG
CCCATCGCCG TGGCGGATGC CCCCTGCACC CCCAAGGGCC GTCGCCGTGT GGAAGAAGCC
TGCATCGCGC CCTATGGCGT CGGGTTGCAC GCGGCCCGCC AATGGCTGGC AGAGGCCAGG
CGCCCCCTCA TCATCGCAGG CCTCGACGTG CTGCGCGATT CTGCCGACGA CACGTTGGAG
GCCTTCGCCG AACGCTTCGG TGCACCGGTC ATCACCACCT ACAAGGCCAA GGGCGTGCTG
CCCGAAGATC ACGCCCTGGC GCTTGGCGGC GCGGGCCTGT CACCCTTGGC GGACACGCAT
CTGCTGCCGC TTGTGGCACA GGCGGATCTG ATCCTGTTGG TCGGGTATGA CCCAATCGAG
ATGCGACCCG GCTGGCGGGA AGTCTGGGAC CCGAACAAGC AACGCGTCAT TGATATACAG
GCCGTCTCCA ACCGCCACTA CATGCATCAG GCGGGCCTCA GTTTCACCTG CCACGTGGGA
GGAGCGCTGA CGGCATTGTT CGATGTAGAG CCGCAGGAGA CCTGGCCGGA GCGCGAGGTT
GCTGCCACGA AGACCGCCCT CGCGGCGTCC TTCCCTGAAG ATGACGATTG GGGCCCGGCA
GGTGTGATCG CCGAAGCCCG CGCGGCGCTG CCCGCCAGCA CGCGGGCCAG CGTCGACAGC
GGTGCGCACC GCATCCTGCT CAGCCAGATG TGGACCTGCC CGATGCCGCG GGCGCTGATC
CAATCCACAG CGCTGTGCAC CATGGGCTGT GCTGTTCCCA TGGCCATGGG CCTGGCGCTT
GCCGACCCGG ACAGCCCCGC CGTGGGGTTC GTGGGCGACG GGGGCTTCCT GATGGTCGCC
GGAGAATTGA CGACAGCGGC CGAGATGGAC CTGCGACCGA TTATTATCGT TTTCGTGGAC
GCCTCGCTGG CGTTGATCGA GAAAAAGCAG CGTGAGCGGC AGTTGAAGAA CGCCGCCGTG
GATTACCCGG CCCGACACGA CATCGCGGGC ATTGGCCGTG CGATGGGGGG CGCAGGTGTT
ACCGTGCACA ACCGGGCCGA ATTGCGCGCC GCCATTGAGA CCGCGCTGGA GGCTGATACC
TTCACCGTCA TCGCCGCAGA GATTGAGAGG GGGGGCTACG ATGGCCGCAT CTGA
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| Protein sequence | MMGEMRAADA VAERLYEAGC RHAFGMPGGE VLTIVDALEK AGIAFHLVKH ENAGGFIGEG
VHHVDGAPVV LVATVGPGLM NAVNVVANAE QDRVPMVVLT GCLDADEALT YTHQVLDHRA
VLDPITKATF TLSAAEADTI ADKAVAIAME RRAGPVLIDV PIAVADAPCT PKGRRRVEEA
CIAPYGVGLH AARQWLAEAR RPLIIAGLDV LRDSADDTLE AFAERFGAPV ITTYKAKGVL
PEDHALALGG AGLSPLADTH LLPLVAQADL ILLVGYDPIE MRPGWREVWD PNKQRVIDIQ
AVSNRHYMHQ AGLSFTCHVG GALTALFDVE PQETWPEREV AATKTALAAS FPEDDDWGPA
GVIAEARAAL PASTRASVDS GAHRILLSQM WTCPMPRALI QSTALCTMGC AVPMAMGLAL
ADPDSPAVGF VGDGGFLMVA GELTTAAEMD LRPIIIVFVD ASLALIEKKQ RERQLKNAAV
DYPARHDIAG IGRAMGGAGV TVHNRAELRA AIETALEADT FTVIAAEIER GGYDGRI
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