Gene Jann_3201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3201 
Symbol 
ID3935672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3242267 
End bp3243556 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content61% 
IMG OID637905572 
Producthypothetical protein 
Protein accessionYP_511143 
Protein GI89055692 
COG category[S] Function unknown 
COG ID[COG4645] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0570955 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAGCA CAACACCAGA TTTTGCACCT ACCCCGCGCG CCGCAACTCA AGCCGCAGCG 
CCAGCAACCG TGCGCGATCC GCGCTTGGAT TTCTTCCGGG GCATTGCGAT GATCATCATC
CTTTTCGCCC ACACGCCGGG CAACTTCTTC ACTTCCTGGA TTCCGGCGCG CTGGGGGTTT
TCAGACGCGA CGGAGATGTT TGTGTTTTGC TCCGGTATGG CCTCGGCCAT TGCGTTTGGA
CGCACATTCG ACCGGGCGGG CTGGGGCCTC GGCACCACGC GCGTGGCCTT CCGCTGCTGG
CAGGTCTACT GGGCCCATAT TGGCATGTTC TTCGCCATCG CCGCCTTGAT GGTCGGGCTG
AACGCGCTGG GCCCGTTCGA GCGGAACTAT GTGGGGCAGT TGAACCTCTT TCCGTTTTTC
GATGGTATCA CCCGTGACGG CGTCTTGGTG TCGGACACGA TGGACCAAAT GTTGGGTCTC
GTGACGCTGA CCTATGTGCC GAACTACTTC GACATTCTGC CGATGTACCT GGTGATCCTG
GTGATGATGC CTGTCGTGAT GGCTCTGGCC CGCGTCAACC TGTGGCTGAC CGGAGCCGTC
GTCCTGACCG TCTGGCTGTT CGCGCAGAGC CGTATTCTGG ACGCGCTTGG CGTCGGCCAT
TTGGTTCTAT CGTTGCCAGC AGAGCCGTGG AGTGACCGGC AGTGGTTCTT CAACCCCTTC
GGCTGGCAAC TGATCTTTTT CACCGGCTTT GCCTTCATGA TCGGCTGGAT CCCGAAACCG
CCCGTGAAAT GGTGGTTGAT CGCTGTGGCA CTAGTGATCG TGCTGGCCAA CATCCCGCTG
TCCAACATTG GCGTGCGCGC CGTGAACCGC GAGTGGTTCG GCCTGGCGTT CGACAACAAC
CCCGTCATTG ACTGGCGCGT GGCCAACCGG ATGTGGATCA CCAAATCCGA CTTTGGCCTG
TTCCGCTTCG CGCAGTTCCT GTCGCTGGCC TATCTGGCGT GGGTTCTGGT TGGCGAAGGG
GGCAGCCGGT TGATCGCAAC GGGATCGGGA ATAGGCGCCC GGGTCTGGGC GCGGATTGTC
GCTCTGCTCA TGAAGATCGG GCAGCAGAGC CTTGCGATCT TTGTCTTTTC GATGATCCTC
GCGCGGCTCA ACGGGTTCTG GCTGGATCAA TGGGGCCGGG ATGTGACGTG GCACACGGTC
TTCGTGAACC TTGTCGGCGT CGCCCTGCTG GTGGTGGTGG CCTACAGCGT GGGGTGGGTG
AAATCGCAAC CCTGGCGGGT GAAGCGATGA
 
Protein sequence
MVSTTPDFAP TPRAATQAAA PATVRDPRLD FFRGIAMIII LFAHTPGNFF TSWIPARWGF 
SDATEMFVFC SGMASAIAFG RTFDRAGWGL GTTRVAFRCW QVYWAHIGMF FAIAALMVGL
NALGPFERNY VGQLNLFPFF DGITRDGVLV SDTMDQMLGL VTLTYVPNYF DILPMYLVIL
VMMPVVMALA RVNLWLTGAV VLTVWLFAQS RILDALGVGH LVLSLPAEPW SDRQWFFNPF
GWQLIFFTGF AFMIGWIPKP PVKWWLIAVA LVIVLANIPL SNIGVRAVNR EWFGLAFDNN
PVIDWRVANR MWITKSDFGL FRFAQFLSLA YLAWVLVGEG GSRLIATGSG IGARVWARIV
ALLMKIGQQS LAIFVFSMIL ARLNGFWLDQ WGRDVTWHTV FVNLVGVALL VVVAYSVGWV
KSQPWRVKR