| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3190 |
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| Symbol | |
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| ID | 3935661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3232070 |
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| End bp | 3232723 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637905561 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_511132 |
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| Protein GI | 89055681 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACCC TGATCACGGG CGCGAACCGG GGACTCGGCC TGGGCCTGGC AGAGCATTAT
CGCACCGCAG GAGAGACGGT GATCGGCACG TCGCGCGATG GCGAGGCCGG TGTGCGGCTG
GACGTGACGG ATACGACGTC ACTTGCCAAC CTGAGCGAAA CACTGGGCGA CGACCCCATA
GACACGCTGA TCTGTAACGC AGGCGTTTTT CTGGACCGCC ACGAGAAAAC TGAGACCGGG
TATGCGGCAA AGCTGTGGAA GCGGACCTTC GCCACCAATG TCATGGGCGT CTTCCTGACA
ATTCAGACCG TGCTCCCCAA CCTCAAGACC GCCAAGACCG CCAAGACCCC GAAGATCGTC
ATTATCTCAA GTCAAATGGG CTCTTCGGCA AAAGCGGGCG GCAATGCGCT GATCTACCGG
GCGTCCAAGG CGGCAGCCCT GAACCTTGGC CGCAACCTGG CCGTGGATCT TGAACTGGAC
GGGATCGCCG TTGGCATCTA CCACCCGGGC TGGGTGCGCA CGGATATGGG CGGTGGTGGG
GCAGCAATCT CGGTCTACAC GTCGGTCAAG GGTCTCTCCC ATCAAATTGA GGCGCTTAGC
CTGGAGACAA CAGGATGCTT CCTGAACTGG GACGGCAATC CGCAGGATTA CTAA
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| Protein sequence | MTTLITGANR GLGLGLAEHY RTAGETVIGT SRDGEAGVRL DVTDTTSLAN LSETLGDDPI
DTLICNAGVF LDRHEKTETG YAAKLWKRTF ATNVMGVFLT IQTVLPNLKT AKTAKTPKIV
IISSQMGSSA KAGGNALIYR ASKAAALNLG RNLAVDLELD GIAVGIYHPG WVRTDMGGGG
AAISVYTSVK GLSHQIEALS LETTGCFLNW DGNPQDY
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