| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3172 |
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| Symbol | |
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| ID | 3935643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3211093 |
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| End bp | 3211995 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637905543 |
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| Product | HflC protein |
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| Protein accession | YP_511114 |
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| Protein GI | 89055663 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGTA TAACTTATCT TATCCCCGTT GTCGTCCTCG GTATCGTGCT TCTGTCTTCC
TCCATCTTCG TGGTGGATGA ACGGCAGCGC GCGCTGGTCC TGCAGTTTGG TCAGATCCGT
CAGGTCATCG ACGAGCCCGG CCTGAACTTC AAAATCCCGT TCATCCAGAA CGTCATCTAC
TACGAGGACC GCATCCTGTC GCTTGATACT GCCGCGACAG AGGTCACGCC GTCCGATGAC
CGTCGTTTGG TCGTGGATGC CTTCGCGCGC TACCGCATCG TCGATACCGA GCAGTTTAAC
CGGGCCGTGG GTGGCGGTGG TATTCGCCGC GCCGACGACC TGATCGAAGC CATTCTGACG
GACCGGATCC GGGCCGTTCT GGGTGCCGAT GGTGTGACCT CCAACACCAT CCTTTCAGAA
GAACGGGCCG GTCTGATGGT GCAGATCACG GCCCAGGCAC GGGCCCGGGC GGAATCGCTT
GGGGTCCGGG TTCTTGATGT TCGTCTGAAG CAAACGAACC TTCCGGCTCA GAACCTCGAT
GCGACCTTTG CCCGGATGCG GGCGGAGCGT GAACGGGAGG CCGCAGACGA GATCGCCCGT
GGTGAAGAGG CCGCGCAGCG GATCCGAGCC ACAGCGGATC GTACGGTGGT GGAGCTTGTC
TCCGACGCCG CGCGGGAGGC CGAGATCACT CGAGGTGAGG CGGACGCCGA GCGGACGCGG
ATCTTCGCGG AGGCGTTCGG CCAGGACACC GAGTTCTTCG ACTTCACCCG TTCGCTTACG
GCTTACGAAC GCGCGCTGGG TGAAAACTCC AGCTTCGTGA TCAGCCCCGA CAGCGAGTTC
TTCGGCTACT TCGATGGCTC GGCCCTCGGG GGCGGCAATT CGCTGGCACC TGCCGGGCAA
TAA
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| Protein sequence | MRRITYLIPV VVLGIVLLSS SIFVVDERQR ALVLQFGQIR QVIDEPGLNF KIPFIQNVIY
YEDRILSLDT AATEVTPSDD RRLVVDAFAR YRIVDTEQFN RAVGGGGIRR ADDLIEAILT
DRIRAVLGAD GVTSNTILSE ERAGLMVQIT AQARARAESL GVRVLDVRLK QTNLPAQNLD
ATFARMRAER EREAADEIAR GEEAAQRIRA TADRTVVELV SDAAREAEIT RGEADAERTR
IFAEAFGQDT EFFDFTRSLT AYERALGENS SFVISPDSEF FGYFDGSALG GGNSLAPAGQ
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