| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3167 |
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| Symbol | |
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| ID | 3935638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3206973 |
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| End bp | 3207800 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637905538 |
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| Product | Integrins alpha chain |
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| Protein accession | YP_511109 |
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| Protein GI | 89055658 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.668778 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGCCGC GTCATCCGCC CCGTGCGTTG AAAGGCTGCG CGCGCGGCGT GTGGATGGGC
CTGTGCCTGG GGGTGGCGTC GGCGGGCGCA GCGTTTGGGT GCAGCGCCGC GCTTCACCTG
GAAACTCAGA TGCCGGAAAG CGTCAGCGCT GCGGGGCTCA ACGGAGGCCT GGCTTGGTAT
GACGGCCCGA CGACACGCTA TGCTCATGGC GTCCTTGGGG ACGCGATTGA GGGGACGGAA
CTGCACGCCT ACACAGACCG TGCGAGCGTG GCCTGCGGTG TCCCGTCCGC TGTCCTTCCG
GAAGAGCTGG TGTTCGAGGA TACCGCCCCG CGCCTTATCG ACCTCGACTT CGATGGCCGC
CCGGAGATCA TCGTGGTGCA AAGTCACCAG CGATTGGGTG CGCAACTGGC CGTCTACTCT
TTTGCAGATG ATGGCGTCAG CCTCCGCGAA ACCGCTGCGA CGCCGTTCAT CGGGCGGTCC
AACCGCTGGC TTGCCCCCAT CGGGGCGGCC GACTTGAACG GTGACGGTCT GATGGAAATC
GCCTATATCG ACCGACCGCA TCTGGCCCGC ACCTTGCGGG TCTGGCGGTT TGAGGATGGT
GCCTTGACCG AAATCGCTAC TATGGAAGGC CTCACCAATC ATCGCATCGG GGAGCCGTTC
ATCACCGGCG GCATCCGGGA TTGCGGCGAC GGCCCGGAGA TGATCACTGC CAACCAGGGC
TGGAGCCAGG TTATGGCGAC ACGCTTTATC GGCGACACGC TGGACACCCG TGGATTGGGT
GCATTTTCAC CCGCCGCCAT CAGCCAGGCG CTGGCGTGTC AGCTGTGA
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| Protein sequence | MAPRHPPRAL KGCARGVWMG LCLGVASAGA AFGCSAALHL ETQMPESVSA AGLNGGLAWY
DGPTTRYAHG VLGDAIEGTE LHAYTDRASV ACGVPSAVLP EELVFEDTAP RLIDLDFDGR
PEIIVVQSHQ RLGAQLAVYS FADDGVSLRE TAATPFIGRS NRWLAPIGAA DLNGDGLMEI
AYIDRPHLAR TLRVWRFEDG ALTEIATMEG LTNHRIGEPF ITGGIRDCGD GPEMITANQG
WSQVMATRFI GDTLDTRGLG AFSPAAISQA LACQL
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