| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3155 |
|---|
| Symbol | |
|---|
| ID | 3935626 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 3194652 |
|---|
| End bp | 3195614 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637905526 |
|---|
| Product | cytochrome c oxidase, subunit II |
|---|
| Protein accession | YP_511097 |
|---|
| Protein GI | 89055646 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 |
|---|
| TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGGTC CGCGCGCCCG AGGCCTTTTG AGCTTCAGTG CGGACGACCG GACGGACAAC
AGGACAGACC ACATGGCACT TCGCACGATG CTCGGCGGCC TCACGGCCAC ACTTGGCGCA
ACCCTTACCG CAACCCTGGC GACCGCACAG ACGGCAGGGA TGCGCGATGG TCTGGAGATC
CTGGGCGCGC CAATCCCGGG CGGGATCGAC TTTCAGCCCG CCGCCACAAA TGGCGCGTTG
GACCTGCAAG CACTGGATCT GGGCCTGCAT ATTGTCGCCA CGCTCATCAC GCTCTTCGTG
GCGGGCCTGA TGGTTTACGC CTTCATCAAG CACAACGCCA AAGCCAACCC GGAGCCCGCG
ACCTTCACCC ACAACACGCG GATCGAGGTG GCCTGGACGA TTGTGCCCCT GATCATCCTT
GTGGGCATCG GCGCGTTCTC TCTGCCGGTC CTGTTCTGCC AGCAAACGAT TCCCGAGGCG
GATGTCGTCG TGAAGGCCAT CGGCTACCAG TGGTACTGGG GCTATGAGTA TCCCGAAGAG
GGCATCGCCT ACGACAGCTT CATGCTGGCC GAGGATGAAC TGGCCGATTA CGGCTACTCG
CGCGATGAGT TCCTGCTGGC CACGGACACG GCGGTCGTTG TGCCCACCGG CCAGACGATT
GTGGTGCAGG TCACGGCTGC CGACGTGATC CACTCCTGGA CGATCCCGGC CTTTGGCGTG
AAGCAGGACG GCGTGCCGGG CCGCCTGGCC GAGTTGCACT TTGAGGTGAA CCCGGGCGAG
GAAGGCATTT ACTTCGGCCA ATGCTCTGAG TTGTGCGGGG CCGCCCACGC CTACATGCCG
ATCACGGTCT TCGCAGTGAC GCCCGAGGAA TATGAGGCAT GGCTGGCAGG CGAGGCGGCG
GAATTCGCAT CGCTCGAAGG GGCCCGCGCG CCCGAATACA TCGAACTGGC AGCGGCGGAG
TAA
|
|---|
| Protein sequence | MTGPRARGLL SFSADDRTDN RTDHMALRTM LGGLTATLGA TLTATLATAQ TAGMRDGLEI
LGAPIPGGID FQPAATNGAL DLQALDLGLH IVATLITLFV AGLMVYAFIK HNAKANPEPA
TFTHNTRIEV AWTIVPLIIL VGIGAFSLPV LFCQQTIPEA DVVVKAIGYQ WYWGYEYPEE
GIAYDSFMLA EDELADYGYS RDEFLLATDT AVVVPTGQTI VVQVTAADVI HSWTIPAFGV
KQDGVPGRLA ELHFEVNPGE EGIYFGQCSE LCGAAHAYMP ITVFAVTPEE YEAWLAGEAA
EFASLEGARA PEYIELAAAE
|
|---|
| |