| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3151 |
|---|
| Symbol | |
|---|
| ID | 3935622 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 3192101 |
|---|
| End bp | 3192913 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637905522 |
|---|
| Product | cytochrome c oxidase, subunit III |
|---|
| Protein accession | YP_511093 |
|---|
| Protein GI | 89055642 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.874863 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCACG CCAAACGCCA CGACTATCAC ATCCTTCCGC CCTCTATCTG GCCCCTGATC
GCCGCTGCGG GCGCATTCGC CATGCTGTTT GGCGGCGTGA ACTGGATGCA TGCGGGCACG
CCCTGGTTGT TCCTCGCGGG TTTCGCGGCG GTCCTTTACG TCATGTATGC GTGGTGGGCG
GATGTCGTGG CCGAAAGCGG AGAGGGCGAT CACACGCCCG TCGTGCGCAT CGGGCTGCGC
TACGGCTTCA TCATGTTCAT CATGTCCGAG GTCATGTTCT TCGTGGCGTG GTTCTGGGCG
TTCTTTAAGC ACACGCTCTT CCCGATGAAC ACGTTTGAGG CCTCCACCTA CATCCCGCCA
GAAATCTATC AGGTCGATCC GTTCCACCTG CCGCTGATCA ACACGTTGGT TTTGCTGTTG
TCCGGTTGCC TGGTGACCTG GGCGCACCAT GCGCTGGTTC ACGGCGGGTC GCGCAAGGAT
GTGGAAACCG GCCTTCTGGG CGCTGTGGTT CTGGGTGTCG CCTTCACGGG GCTTCAGGCC
TATGAGTATT ATGAGCTGAT CGCCCACCAT CATTGGCAGT TCGGCGGTCC GGACGGCGAC
AAATTCTACT CCACCTTCTT CATGGCCACA GGCTTCCATG GCTTCCACGT GGTGATCGGC
ACGATCTTCC TGTTCATCTG CTACCTGCGC GTACGCAAGG GCCACTTTAC CGCAGAGAAA
CATATCGGGT TCGAGGCCGC CGCCTGGTAT TGGCACTTCG TGGACGTGGT GTGGCTGTTC
CTGTTTGTTG CGGTCTACAT CTGGGGTCAG TAA
|
|---|
| Protein sequence | MAHAKRHDYH ILPPSIWPLI AAAGAFAMLF GGVNWMHAGT PWLFLAGFAA VLYVMYAWWA
DVVAESGEGD HTPVVRIGLR YGFIMFIMSE VMFFVAWFWA FFKHTLFPMN TFEASTYIPP
EIYQVDPFHL PLINTLVLLL SGCLVTWAHH ALVHGGSRKD VETGLLGAVV LGVAFTGLQA
YEYYELIAHH HWQFGGPDGD KFYSTFFMAT GFHGFHVVIG TIFLFICYLR VRKGHFTAEK
HIGFEAAAWY WHFVDVVWLF LFVAVYIWGQ
|
|---|
| |