Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3131 |
Symbol | |
ID | 3935602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 3172171 |
End bp | 3173565 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637905502 |
Product | response regulator receiver modulated diguanylate cyclase |
Protein accession | YP_511073 |
Protein GI | 89055622 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.308445 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAGGGC GTATTCTTGT CGTTGACGAC GTTGCGACCA ACCGGATCGT GATGAAAGTG AAACTCACTG CGGCCTGCTA CTCGGTGGAT CAGGCCGAAA ACGGGGCCGC TGCCCTCAAG GCCGCGCGCG AGACGAAGCC GGATCTCATC CTTCTGGACG TCATGATGCC GGACATGAGC GGGCTGGACG TCTGTCGCGC GCTCAAAGCC GACCCTGAGA CCGCAGATAT TCCCGTGGTC CTGATCACCG CCCTCTTTGA TCAAGCCGCC AAGATGGATG GGCTGGAGGC GGGGGCCGAT GATTTCCTGA CCAAGCCGGT GGAGGAGGTG ACGCTGCTTG CGCGGGTGCG CTCGCTCCTG CGGGTCAGCG ATTCCGTGCG CGAATTGCGC GCCCGTGATG ATACCGTGTC AGCCTACGGT TTTGCCGAGG CCGCGCAGGG GTTTGAGGGC AAGGCACGCC CCGGCCATGT GGCGCTTGTG GCGCCGGGGC CGCGCGGTGC GGTCCTGTGG AAGGCCGCCA TTGATGACCG TATCGGTGGC GAGGTTCAGA TCATTCCGCG TGAGACGGCC CTGACCCAGG CCACCGGCAC TGGCAACGAC CCCGATGTCT TCGTGATCTC GGTCGATCTG GCGCAACGCA ATGAAGGGCT TCGCCTGCTC TCGGATCTGC GGTCCCGCCC CGGCACGCGC CACTCCGCGA TCGTGATGAT CCTGCCCGAG GGCGATAGCG AGCGGGCCGC GATTGCGCTC GATCTGGGGG CCAACGATGT GCTCCACGAT CCGTTTGACG CGCAAGAACT GGCCATTCGT ATCTCTGCAC AGCTTGATCG CAAGCGGCAA TCGGACCGGA TGCGCGCGGG CGTGCGCGCC AGTCTGGAGG CCGCGATCAC CGATCCGCTC ACCGGCCTTT ACAACCGTCG CTTCGCGCTG CACCGGATGG AGCAGATCAT GGCGCGGCCC GGCGGCGATC CGGCGGTCAT GATGCTGGAT CTCGATTACT TCAAGCAGAT CAACGACACC TATGGCCATG CGGCGGGCGA TGCTGTGTTG CAAGAGGTCG CGATCCGGCT GCGCGGGCAG GTTCAGGCCA ATGACCTTGT TGCGCGTATC GGTGGAGAAG AGTTTCTGGT CGTCCTGTCC GGAGCCAGTG CGCGGGCCGC GACGGAATGT GCCGAGCGGT TGCGCGCCTG CATCGGCGGG ATGAGCTTTG ACCTGGGTGG CGACACCTTC CCCGTCCGCG TGACCGCCAG TGTTGGTCTG TCCCTGCCGG GCAGTTCTGA TCCTCACACG ACCAGCACGC CGGAGGCATT GATCCACAAG GCCGACACGG CGCTCTATGG CGCCAAGGCC CATGGCCGCG ATCAGGTCAG CCAGATGTGC GACACCGCCG CCTAG
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Protein sequence | MVGRILVVDD VATNRIVMKV KLTAACYSVD QAENGAAALK AARETKPDLI LLDVMMPDMS GLDVCRALKA DPETADIPVV LITALFDQAA KMDGLEAGAD DFLTKPVEEV TLLARVRSLL RVSDSVRELR ARDDTVSAYG FAEAAQGFEG KARPGHVALV APGPRGAVLW KAAIDDRIGG EVQIIPRETA LTQATGTGND PDVFVISVDL AQRNEGLRLL SDLRSRPGTR HSAIVMILPE GDSERAAIAL DLGANDVLHD PFDAQELAIR ISAQLDRKRQ SDRMRAGVRA SLEAAITDPL TGLYNRRFAL HRMEQIMARP GGDPAVMMLD LDYFKQINDT YGHAAGDAVL QEVAIRLRGQ VQANDLVARI GGEEFLVVLS GASARAATEC AERLRACIGG MSFDLGGDTF PVRVTASVGL SLPGSSDPHT TSTPEALIHK ADTALYGAKA HGRDQVSQMC DTAA
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