| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3129 |
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| Symbol | |
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| ID | 3935600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3171072 |
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| End bp | 3171779 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637905500 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_511071 |
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| Protein GI | 89055620 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.27329 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTATGA GACATGGTGA CATACGGGGG ATCGTCTTCG ACAAGGACGG CGTCCTGTTT
GATCTGCAAC GGACATGGGG CCCCTGGCTT GCGGCGATGA TCCAGGCTTT GGCCGATGGG
TCGCACGACC GGGCCTTGCG CCTAGCAGAC CTGCTCGACT TTGACTTGAC TACGCAGAGG
TTTCAGCCCG GAAGCCTGGC CATTGCAGGC ACGACGCGGG AGGTAGCGAA CGCCATCGCT
CCGGTGTTGC CCGGGCGGGA GGCGGAGGAA ATCTGGCAGT TCCTGGACGG TGAAGGCGCC
CGAGTAACGG TGCGGGAAAC GGTGCCGCTG CGGCAAACGC TTGGCGCATT GCGGGACCGG
GGGCTGACCC TTGGCGTAGC CACCAATGAC ACGGAAGTCG GTGCCCGCGC GCACCTGCGA
AGCGTCGGCG CGGAGGGGAT TTTCGATTTC ATAGCAGGCT GTGACAGCGG GTTCGGCGCG
AAACCCGATC CGGGCATGTG TCTGGCGTTT GCCCAGACCA CCGGCATCGC GCCCGAGGCG
CTGGTGATGG TGGGCGACAG CACACACGAT ATACATGCAG GCCGCGCGGC GGGGTTCACC
TGCGTGGCGG TTCTGACCGG TGTTGCGACA GCCGACGACC TGGCCCCCTC CGCCGATGCG
GTTCTGCCCG ATATTGCGGC GCTGGGGGCA TGGCTGGACG GGCGCTGA
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| Protein sequence | MSMRHGDIRG IVFDKDGVLF DLQRTWGPWL AAMIQALADG SHDRALRLAD LLDFDLTTQR
FQPGSLAIAG TTREVANAIA PVLPGREAEE IWQFLDGEGA RVTVRETVPL RQTLGALRDR
GLTLGVATND TEVGARAHLR SVGAEGIFDF IAGCDSGFGA KPDPGMCLAF AQTTGIAPEA
LVMVGDSTHD IHAGRAAGFT CVAVLTGVAT ADDLAPSADA VLPDIAALGA WLDGR
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