Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3127 |
Symbol | |
ID | 3935598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 3168740 |
End bp | 3169327 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637905498 |
Product | hypothetical protein |
Protein accession | YP_511069 |
Protein GI | 89055618 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.313487 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.151967 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACGGAA TGATCAACCG CGCGCTGCAA GGATTTATTG TCGAGACATA CGGCGATGAC GTCTGGGCAG AGGTTCGGAC TATGGCGGAC CTCCGGATCG ATGAATTCGA GGCGATGCTG CACTACGATG ACACGCTGAC GGCCGCGTGT TTTGAAGCTG TGGTACACGT TATGCACCAA GACGCCGCAT CGGTGCGGGA GGATTTGGGA ACATTTTTGA TCACCCATCC CCCCTTGGAT CCCTTGCGCC GCCTCTTGCG GTTCGGCGGG GCGACATTCA CCGAATTTCT TTTGTCGTTG AACGAGTTGG CGGACAGGGG GCGTATGGCA ATTCCCGATA TCGGATTGCC TGAGATCAAC GTTCAACAGG TAAACGCGAC GCTGTTCAGG CTGCGTGTGG ACTGGTCTCT GCCAGGGGCC AGCGCGATCC TGTTGGGGGC CTTGCGCGCC ATGGCCGACG ATTATGGAGC GCTTGCGTCC CTCAGTATCG ATGAGGATGG CGGACGGGGG GAGTGTCTGC GGGTTGAAAT TCACGACACG CACCATGCGG AAGGACGCCA CTTTGTTTTG GCGGAGGGCG TTCATTGA
|
Protein sequence | MHGMINRALQ GFIVETYGDD VWAEVRTMAD LRIDEFEAML HYDDTLTAAC FEAVVHVMHQ DAASVREDLG TFLITHPPLD PLRRLLRFGG ATFTEFLLSL NELADRGRMA IPDIGLPEIN VQQVNATLFR LRVDWSLPGA SAILLGALRA MADDYGALAS LSIDEDGGRG ECLRVEIHDT HHAEGRHFVL AEGVH
|
| |