| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3125 |
|---|
| Symbol | |
|---|
| ID | 3935596 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 3166321 |
|---|
| End bp | 3167646 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637905496 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_511067 |
|---|
| Protein GI | 89055616 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0661] Predicted unusual protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0113862 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.167707 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGACC CCTCTGCCCC GCTGCGCCCA AGCGCCGTGC CCACCGGTCG CATCGCGCGC
CTGACCCGGT TGGGCGGGCT CGCCACGGGC CTTGCCGGGC GGGCAGCTTA CGGGCGTGCC
GCCGCGGCGC TTCGCGGCCA ATCCCCTGAT ATGGCGGCCC TTCTTCTGAC ACCGGCAAAT
GTCACCCGCA TCACCGAGCG GCTGTCCGAG ATGCGCGGGG CCACGATGAA ATTGGGGCAG
CTTCTGTCGA TGGAAAGCGG TGATGTCCTG CCGCCGGAAC TGGCGGCAAT CCTTGCGCGC
CTACGTGCGG ATGCCGATGC GATGCCGCCA AAACAGCTCA AGACCGTTTT GGCGACTGTC
TATGGCTCGG ATTTTCGACA CAAATTCAAA AGCTTCAACC CCCAACCCCT TGCGGCTGCC
TCCATCGGAC AAGTGCATCG CGCGACAGCG GCGGACGGGA TGCGCCTGGC GCTGAAGCTG
CAATATCCGG GCGTGCGCGA TTCAATCGAC AGCGACCTTG ACAACGCCGC CGCGCTCATC
CGCTGGTCGG GTCTGTGGCC GCGGGAACTC GACATTGCTC CCCTCATGCG GGAGGCCCGT
CTTCAACTCC ACGAAGAGGC GGACTACACC CGAGAAGGCA CTTATTTGCA GCGCTTCGGG
GATCTGCTGA AAGAGGATGC GCGCTTCATC GTGCCAGAAC ATCGCCCCGA TCTGTCCACC
CGCGATGCGT TGGCGATGAG CTTTGAGCAA TCCGCCCCGA TAGAGGCTTT GGCCGATGCC
GCACCCGCCA CACGCGACGG CGCGGCCCAT GCACTGATCG AGCTGTGTTT GCGGGAGCTG
TTCGTGTTCC ACGTCATGCA AACGGACCCA AATTTCGCGA ATTATCAGTG GCGGGCGGAG
ACCGAACAGA TCGTCTTGCT CGACTTTGGC GCGGCCCGCG ACATTCCCCA GGATCTCGCC
GATGGCCACA TGCGACTTCT GCGCGCCGGG CTGGGTGGCA TGCGGTCCGA CATCCTGGCG
GCGCTGGAGG ATATTGGCTT CATCAAACCA GGCCTCAGCG ACGCCCATCG TGACGCGATC
CTGGATATGT CCGAGCTTGG ATTCGGTGCC CTGCGCGGGG CGGAGCCGTT CGATTTTGCG
ACCTCGACGC TCGCCGATCA ACTCCGCCAT CGGGGCCAAG TGATTGGGCA GGAGCGAGAA
CTCTGGCATA TCCCACCGGC GGACACATTG TTTTTGCAAC GCAAGATTGG CGGGCTTTAT
CTGCTGGCCA CGCGGCTTGG GGCGCGGGTC GATCTGCCAG CAATCGCACG GTCCTTCGCA
GCCTGA
|
|---|
| Protein sequence | MSDPSAPLRP SAVPTGRIAR LTRLGGLATG LAGRAAYGRA AAALRGQSPD MAALLLTPAN
VTRITERLSE MRGATMKLGQ LLSMESGDVL PPELAAILAR LRADADAMPP KQLKTVLATV
YGSDFRHKFK SFNPQPLAAA SIGQVHRATA ADGMRLALKL QYPGVRDSID SDLDNAAALI
RWSGLWPREL DIAPLMREAR LQLHEEADYT REGTYLQRFG DLLKEDARFI VPEHRPDLST
RDALAMSFEQ SAPIEALADA APATRDGAAH ALIELCLREL FVFHVMQTDP NFANYQWRAE
TEQIVLLDFG AARDIPQDLA DGHMRLLRAG LGGMRSDILA ALEDIGFIKP GLSDAHRDAI
LDMSELGFGA LRGAEPFDFA TSTLADQLRH RGQVIGQERE LWHIPPADTL FLQRKIGGLY
LLATRLGARV DLPAIARSFA A
|
|---|
| |