| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3113 |
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| Symbol | |
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| ID | 3935584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3147769 |
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| End bp | 3149685 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637905484 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_511055 |
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| Protein GI | 89055604 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCACAGA AGACATCCAC ACCTCCGCCT GACACAATCC AAGCGGGCGA TATGATCACC
GACTTTGACC AATACCTTTT GGGCGAAGGG ACGCACCGCC AGCTGTGGCG GGTTCTGGGT
GCACATGTGC AAGACGATGC GACGCATTTT GCCGTCTGGG CGCCCAACGC CCGGGCCGTA
TCTGTCACTG GTGATTTCAA CGGCTGGTCG GGCACCGAGA TGACCGCCGT CGGACAGACC
GGCGTCTGGC AGGTGCGCAT TCCGGGCGTA GGCGACGGCG CACTCTACAA ATACCAGATC
ACTGACGCCA ATGGCGCGCT GCGCGAGAAG GCGGACCCCG TGGGCTTCGG CGCGCAGCAC
CCGCCGGAGC AAGCCTCCGT CGTGCGCGAT ATTCGCGGCT ATGGCTGGCG CGACGGCGCT
TGGATGGAAA CCCGTGCTGA GGCGGCTGAC CGCGCGGCCC CAATCTCCAT CTACGAGGTG
CATCTGGGGT CCTGGCGGCG CAAATGGGAC GATGGCGGCA GGCCCCTGTC CTACAAGGAG
GCCGCGCAGG ATCTGGTGGG CTACGTGCGC CACATGGGCT TCACCCATAT CGAGTTGATG
CCGATATCGG AGTTTCCCTT CGACGGGTCC TGGGGCTACC AGCCCGTGGG CCTTTATGCC
CCCACGATCC GCTTCGGCCC GCCGCATGAA TTCCGCGATC TGGTGGATGC CGCCCACGCC
GCCGGTCTTG GCGTCCTGCT GGATTGGGTG CCGGGCCATT TCCCGACCGA CGAGCATGGG
TTGGCGACCT TTGACGGCAC GCATCTCTAT GAACACGCCG ACCCGAAAGA GGGCTTCCAT
CAGGATTGGA ACACTCTGAT CTTCAACTAC GGCCGCACGG AGGTGCGCAA TTACCTCGTC
GCCAATGCGC TGTACTGGAT GGAGGAATAT CACCTCGACG GGCTGCGCGT GGATGCCGTG
GCCTCCATGC TCTACCGCGA TTATTCCCGC GATGAGGGGC AGTGGGTCCC CAACAAAGAC
GGCGGGCGCG AGAACCTTGA GGCGATTTCC TTCCTGCAGG AGATGAACGT CGCGGTCTAC
GGCGCGGATG CCAGCGTCAT GACGGTGGCC GAAGAAAGCA CGTCCTTTCC TGGCGTCTCG
CAGCCCGTTC ATACCGGCGG TCTGGGGTTC GGATACAAGT GGAACATGGG CTGGATGAAC
GACACGCTCA GCTACATGGC GCTTGATCCG ATCCACCGCC AGCACCACCA TTCCCAGATG
ACCAACCCGA TCATGTGGCA GTACTCCGAA AACTTTATCC TGCCGATCAG CCATGATGAG
GTCGTCCATG GCAAAGGCTC CATGCTGGAA AAAATGCCCG GCAATGATTG GGAGAAACTT
GCCAACCTGC GGGCGTATTA CGGCTACATG TGGATGCACC CCGGCAAGAA GCTGATCTTC
ATGGGATGCG AGTTCGCGCA ACCCGGGGAA TGGTCCCATG ACGGCGATCT GAATTGGGAC
GCGGCCAGCC GACCGGCCCA TGCGGGCGTG CAAGCATTGG TGCGTGACCT CAACCATCTC
TATCGCGACA CGCCTGCGCT GCACGTCAAG GATTGTATGC CAGACGGTTT CGCCTGGATC
TGCAACGACC CTGCGCAATC CACCCTCGGG TTCGCGCGCT TCGGGGCCGC GGGTGACGCG
CCCGTGGTGG TCATGTGCAA CTTTACACCG GTGGAGCGCG TTGCATTCCG AATGGGCGTG
CCCACGCCGG GAGAGTGGGA CGAAGTTCTC AACACCGACG CAGCCGCCTA TGGCGGCGGC
AATCGCGGCA ATCTGGGTGG GGTTCTGTCT GAGCCGACGC CCTGCGATGG GCATGCGCAG
TCCGTCACGC TGACCCTGCC GCCCTTATCG ACAGTCGTTT TGCGGCTGAA AGACTAA
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| Protein sequence | MAQKTSTPPP DTIQAGDMIT DFDQYLLGEG THRQLWRVLG AHVQDDATHF AVWAPNARAV
SVTGDFNGWS GTEMTAVGQT GVWQVRIPGV GDGALYKYQI TDANGALREK ADPVGFGAQH
PPEQASVVRD IRGYGWRDGA WMETRAEAAD RAAPISIYEV HLGSWRRKWD DGGRPLSYKE
AAQDLVGYVR HMGFTHIELM PISEFPFDGS WGYQPVGLYA PTIRFGPPHE FRDLVDAAHA
AGLGVLLDWV PGHFPTDEHG LATFDGTHLY EHADPKEGFH QDWNTLIFNY GRTEVRNYLV
ANALYWMEEY HLDGLRVDAV ASMLYRDYSR DEGQWVPNKD GGRENLEAIS FLQEMNVAVY
GADASVMTVA EESTSFPGVS QPVHTGGLGF GYKWNMGWMN DTLSYMALDP IHRQHHHSQM
TNPIMWQYSE NFILPISHDE VVHGKGSMLE KMPGNDWEKL ANLRAYYGYM WMHPGKKLIF
MGCEFAQPGE WSHDGDLNWD AASRPAHAGV QALVRDLNHL YRDTPALHVK DCMPDGFAWI
CNDPAQSTLG FARFGAAGDA PVVVMCNFTP VERVAFRMGV PTPGEWDEVL NTDAAAYGGG
NRGNLGGVLS EPTPCDGHAQ SVTLTLPPLS TVVLRLKD
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