Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3096 |
Symbol | |
ID | 3935567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 3132084 |
End bp | 3133709 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637905467 |
Product | putative L-arabinose isomerase protein |
Protein accession | YP_511038 |
Protein GI | 89055587 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2160] L-arabinose isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.695467 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGGAT ATGGCGGCTT CAAATATGCT GGACGGCCCC GACAAGTGGT CATTTTTTGC ATGGGAGAGG TCACATTTGA CAACGGCTTC CTGCCTAGTC TGACGAGACC GGGGCCTGCA AGATGGCAGC GGGCGTCACG ATGTCTGGTG CCATTGATTG GCGCTACCGC GGCAGGAAGG AAGATTGAGA TGGCTGATAT TGCCGCGAAC ACGCTGAAAG TTGGCCTGTT TGGCATCGGT CTTGACGCCT ATTGGCCGCA GTTTGAGGGG CTTGAAGATC GTCTGAAATC CTATGTCGGG CTTGTCGAGG GCAAACTGTC CCGCGATGAT GTGGACGTCG TGAACCTCGG GTTGATCGAC ACTCCGGAAA AGGCGGTTCA GGCGGGGCAT GACTTTCGGA TCGCCGATGT CGATGTCATT TTTTTGTATG TGACGACCTA TGCGTTGTCG TCGACGGTGC TGCCGGTGGT GCGCCGCGCC GGGGTTCCGG TTGTCATTCT CAACCTGCAA CCCGTGGCCT CAATGGATCT GGCGGCGTTC AACGCGCTTG GCAGTCGCGC GAAGATGACC GGAGAATGGC TGGCCCACTG CGCCGCCTGC CCGGTGCCCG AAATCGCCAA TGTCTTCACG CGCGCAGGCA TCGAGTTCCA TCAGATCACC GGTGTGCTGA ACGGCGATGC CCATGTGGAT AATGAGATCG CCGCGTGGAT CGAGGCGGCG CGGGTTGCCC ATATCATGGC GCATACGAAG CTGGGCGTGA TGGGGCATTA CTACAATGGG ATGCTCGACA TCTATTCGGA CATGGCCCTG CAATCGGCGG CGTTCGGAAC CCTCATCGAG ATTGTCGAGA TTGACGAGCT GGCGGCCATC CGGGCTGACC TGACCGAGGC AGAGATCAAC GACACGCTTG TCAGGATAAA GGCCGAGTTC GATATCCAGC CCGACTGCCC CGACGCTGAA CTGCACCGTG CTGCCAGTAC CGCGACCGCG TTGTTCAAAC TTGTGGACCG CCATGGCCTT GGCGCAATGG CGTATTATTA CGAGTCGACG CCCGGCACCG TGCATGAGGA TCTCATCACC TCGGTGATCC TGGGATGCTC CATGCTGACC GCATCCGGTG TGCCGATTGC CGGAGAATAC GAGGTCAAGA ACGCTCAGGC GATGAAGATC ATGGACAGTT TCGGGGTCGG CGGGTCCTTC ACCGAATACT ATGCCATAGA TTACGGCGAT GATGTCGTGA TGATGGGGCA TGACGGGCCG GGTCACACGC AAATCGCCCA AGGCAAGACG AAGGTGCGTC CGTTGGAGGT GTTCCATGGC AAGGTGGGCG CAGGGTTAAG CGTGGAGATG AGCGTCAGGC ACGGCCCGGT GACATGCCTG TCGGTGCTGG AGATCGGAGG AAAAGTGTCC CTCCTCGTGG CCGAGGGAGA GTCCGTTCCC GGCCCGATCC TGGAGATTGG AAATACGAAC AGCCGCTATC GGTTTGAGAT CGGCGCACGT GAATTTGTTG AGGCCTGGAA TGCGGCCGCA CCGGCGCACC ATTGTGCTGT GGGTGTCGGT CATATCGCGA CCCGAATTGA AAAACTTGGG GCGCTGCTGG GGCTTGAGGT TATTCGCGTG TGCTAA
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Protein sequence | MSGYGGFKYA GRPRQVVIFC MGEVTFDNGF LPSLTRPGPA RWQRASRCLV PLIGATAAGR KIEMADIAAN TLKVGLFGIG LDAYWPQFEG LEDRLKSYVG LVEGKLSRDD VDVVNLGLID TPEKAVQAGH DFRIADVDVI FLYVTTYALS STVLPVVRRA GVPVVILNLQ PVASMDLAAF NALGSRAKMT GEWLAHCAAC PVPEIANVFT RAGIEFHQIT GVLNGDAHVD NEIAAWIEAA RVAHIMAHTK LGVMGHYYNG MLDIYSDMAL QSAAFGTLIE IVEIDELAAI RADLTEAEIN DTLVRIKAEF DIQPDCPDAE LHRAASTATA LFKLVDRHGL GAMAYYYEST PGTVHEDLIT SVILGCSMLT ASGVPIAGEY EVKNAQAMKI MDSFGVGGSF TEYYAIDYGD DVVMMGHDGP GHTQIAQGKT KVRPLEVFHG KVGAGLSVEM SVRHGPVTCL SVLEIGGKVS LLVAEGESVP GPILEIGNTN SRYRFEIGAR EFVEAWNAAA PAHHCAVGVG HIATRIEKLG ALLGLEVIRV C
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