| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3096 |
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| Symbol | |
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| ID | 3935567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3132084 |
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| End bp | 3133709 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637905467 |
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| Product | putative L-arabinose isomerase protein |
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| Protein accession | YP_511038 |
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| Protein GI | 89055587 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2160] L-arabinose isomerase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.695467 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGGAT ATGGCGGCTT CAAATATGCT GGACGGCCCC GACAAGTGGT CATTTTTTGC
ATGGGAGAGG TCACATTTGA CAACGGCTTC CTGCCTAGTC TGACGAGACC GGGGCCTGCA
AGATGGCAGC GGGCGTCACG ATGTCTGGTG CCATTGATTG GCGCTACCGC GGCAGGAAGG
AAGATTGAGA TGGCTGATAT TGCCGCGAAC ACGCTGAAAG TTGGCCTGTT TGGCATCGGT
CTTGACGCCT ATTGGCCGCA GTTTGAGGGG CTTGAAGATC GTCTGAAATC CTATGTCGGG
CTTGTCGAGG GCAAACTGTC CCGCGATGAT GTGGACGTCG TGAACCTCGG GTTGATCGAC
ACTCCGGAAA AGGCGGTTCA GGCGGGGCAT GACTTTCGGA TCGCCGATGT CGATGTCATT
TTTTTGTATG TGACGACCTA TGCGTTGTCG TCGACGGTGC TGCCGGTGGT GCGCCGCGCC
GGGGTTCCGG TTGTCATTCT CAACCTGCAA CCCGTGGCCT CAATGGATCT GGCGGCGTTC
AACGCGCTTG GCAGTCGCGC GAAGATGACC GGAGAATGGC TGGCCCACTG CGCCGCCTGC
CCGGTGCCCG AAATCGCCAA TGTCTTCACG CGCGCAGGCA TCGAGTTCCA TCAGATCACC
GGTGTGCTGA ACGGCGATGC CCATGTGGAT AATGAGATCG CCGCGTGGAT CGAGGCGGCG
CGGGTTGCCC ATATCATGGC GCATACGAAG CTGGGCGTGA TGGGGCATTA CTACAATGGG
ATGCTCGACA TCTATTCGGA CATGGCCCTG CAATCGGCGG CGTTCGGAAC CCTCATCGAG
ATTGTCGAGA TTGACGAGCT GGCGGCCATC CGGGCTGACC TGACCGAGGC AGAGATCAAC
GACACGCTTG TCAGGATAAA GGCCGAGTTC GATATCCAGC CCGACTGCCC CGACGCTGAA
CTGCACCGTG CTGCCAGTAC CGCGACCGCG TTGTTCAAAC TTGTGGACCG CCATGGCCTT
GGCGCAATGG CGTATTATTA CGAGTCGACG CCCGGCACCG TGCATGAGGA TCTCATCACC
TCGGTGATCC TGGGATGCTC CATGCTGACC GCATCCGGTG TGCCGATTGC CGGAGAATAC
GAGGTCAAGA ACGCTCAGGC GATGAAGATC ATGGACAGTT TCGGGGTCGG CGGGTCCTTC
ACCGAATACT ATGCCATAGA TTACGGCGAT GATGTCGTGA TGATGGGGCA TGACGGGCCG
GGTCACACGC AAATCGCCCA AGGCAAGACG AAGGTGCGTC CGTTGGAGGT GTTCCATGGC
AAGGTGGGCG CAGGGTTAAG CGTGGAGATG AGCGTCAGGC ACGGCCCGGT GACATGCCTG
TCGGTGCTGG AGATCGGAGG AAAAGTGTCC CTCCTCGTGG CCGAGGGAGA GTCCGTTCCC
GGCCCGATCC TGGAGATTGG AAATACGAAC AGCCGCTATC GGTTTGAGAT CGGCGCACGT
GAATTTGTTG AGGCCTGGAA TGCGGCCGCA CCGGCGCACC ATTGTGCTGT GGGTGTCGGT
CATATCGCGA CCCGAATTGA AAAACTTGGG GCGCTGCTGG GGCTTGAGGT TATTCGCGTG
TGCTAA
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| Protein sequence | MSGYGGFKYA GRPRQVVIFC MGEVTFDNGF LPSLTRPGPA RWQRASRCLV PLIGATAAGR
KIEMADIAAN TLKVGLFGIG LDAYWPQFEG LEDRLKSYVG LVEGKLSRDD VDVVNLGLID
TPEKAVQAGH DFRIADVDVI FLYVTTYALS STVLPVVRRA GVPVVILNLQ PVASMDLAAF
NALGSRAKMT GEWLAHCAAC PVPEIANVFT RAGIEFHQIT GVLNGDAHVD NEIAAWIEAA
RVAHIMAHTK LGVMGHYYNG MLDIYSDMAL QSAAFGTLIE IVEIDELAAI RADLTEAEIN
DTLVRIKAEF DIQPDCPDAE LHRAASTATA LFKLVDRHGL GAMAYYYEST PGTVHEDLIT
SVILGCSMLT ASGVPIAGEY EVKNAQAMKI MDSFGVGGSF TEYYAIDYGD DVVMMGHDGP
GHTQIAQGKT KVRPLEVFHG KVGAGLSVEM SVRHGPVTCL SVLEIGGKVS LLVAEGESVP
GPILEIGNTN SRYRFEIGAR EFVEAWNAAA PAHHCAVGVG HIATRIEKLG ALLGLEVIRV
C
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