| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3093 |
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| Symbol | |
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| ID | 3935564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3128143 |
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| End bp | 3129648 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637905464 |
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| Product | ABC transporter related |
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| Protein accession | YP_511035 |
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| Protein GI | 89055584 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.193565 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.402986 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCTG TTCTTCCGCG TCTGGCGATG CGCGATATTG TCAAAAGTTT CGGATCGGTC
CGTGTTCTGG ACGGGGTGTC GCTGGATGTG ATGCCCGGCG AAATCGTGGC ACTTCTGGGA
TCGAACGGGG CCGGAAAGTC GACGTTGATG AAGATCCTCA CCGCGAATTA CACGAAAAAC
GCGGGCGACA TTCGGGTGAA CGATACCTTG GTTGATTTTG CCTCGCCCCG GGACGCGGCG
CGTGTGGGCA TCACGTTCCT GCCGCAGGAA ATCTCGGTTT TTCCCGAGTT GAGCGTCGCG
GAGAACATCT GCATGAGCGC CGACAGCAAG GGCACGGTCG ACTGGTCCGG CATGGCACGC
CGATCTGCGG CTGTGCTCGA CGATCTTGGT TTTGGCCATC TCAGCCCGGA TATGCTGGTC
GCCGATCTGC CCGTTGCGGA GCGGCGTATC ATCGAGATTG CCCGCGCTTT GGAGGGACAG
GCCGACATTC TGGTTATGGA TGAGCCCACC GCGTCCCTGT CCGAGCAGGA GAGTGAACAG
ATTTTCACCA TCCTGCGCCG TCTGAAGGAC CGGGGGACCA GCATCGTCTA CATCTCCCAC
TACCTCAAAG AGGTGTTCGA GATTTCCGAC AGGATTGTCG TATTGCGCGA CGGTTTGAAC
GCTGGCGAGT TTGACCCCAC TACCGCAGAT GTCACGAAGG TTGTCGGTGC GATGTTGGGC
AAGGCCGCAG GGTCCATGTT CGACGACCGG GACCCGTTAC CGGCAAGCGC GCCGGTGGTG
TTTACCTGCG CGGGCCTGAC CCTGCCGGGT GTGATCGAGG ACGTCTCGTT CGATCTGCGC
GCGGGGGAAA TTCTTGGCAT CTTTGGGCTG ATCGGCTCCG GCGTGGAAGT CCTGGGCCGT
GCCATCTTCG GCACGCAGGG GCGGCCACCC GCGGGGGCAA TGACCCTGAA CGGAACACCC
TATACGCCAG TGTCGCCCCG CAAGGGGAAA GAGGCCGGGA TCGGGTTTGT GACTGCCGAG
CGGAAGACGG ACGGCATCAT GGCCGACATG TCCGTGCGCG AGAATATTGT GGCAGCGTTC
CAGTCCGACC TTGGACATGG GCCGTTCACA TCCCCCGCGC GCGAGGCGGC CCACACCCTG
GACTGGATCG AAAAACTGGG CATCAAGACA TCGGGCCCCG AGCAGGCGAT CCGATTGTTA
TCCGGTGGCA ATCAGCAAAA GGTCTGCGTC GCCCGTTGGC TCAACCCGAA GGTCAAGATG
CTGATCCTGG AAGAGCCGAC CCGGGGCGTC GATGTGGGCG CGCGCCGCGA AATCTACAGC
CATCTGGTGG ACTTTGCCCG CAGCGGTCTG GCGGTTCTGG TGTTGTCGTC AGATGTCGAG
GAAGTCGCGG GCCTGTCGGA CAGGTCACTG GTCATCGACC GTGGGCGCAT TCTGGCGGAA
TTCGGCCGGG GGGCCACGCC GGGTGATCTG ATGGCGGCGT CCGCACAATC TGAACATCAC
GACTAA
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| Protein sequence | MNAVLPRLAM RDIVKSFGSV RVLDGVSLDV MPGEIVALLG SNGAGKSTLM KILTANYTKN
AGDIRVNDTL VDFASPRDAA RVGITFLPQE ISVFPELSVA ENICMSADSK GTVDWSGMAR
RSAAVLDDLG FGHLSPDMLV ADLPVAERRI IEIARALEGQ ADILVMDEPT ASLSEQESEQ
IFTILRRLKD RGTSIVYISH YLKEVFEISD RIVVLRDGLN AGEFDPTTAD VTKVVGAMLG
KAAGSMFDDR DPLPASAPVV FTCAGLTLPG VIEDVSFDLR AGEILGIFGL IGSGVEVLGR
AIFGTQGRPP AGAMTLNGTP YTPVSPRKGK EAGIGFVTAE RKTDGIMADM SVRENIVAAF
QSDLGHGPFT SPAREAAHTL DWIEKLGIKT SGPEQAIRLL SGGNQQKVCV ARWLNPKVKM
LILEEPTRGV DVGARREIYS HLVDFARSGL AVLVLSSDVE EVAGLSDRSL VIDRGRILAE
FGRGATPGDL MAASAQSEHH D
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