| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3092 |
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| Symbol | |
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| ID | 3935563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3127153 |
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| End bp | 3128130 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637905463 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_511034 |
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| Protein GI | 89055583 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.281303 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.348975 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGCC CATCGCCGTC CCAAAGCATC TTCACCCGTC TGTTTGGCGG ATCGGGTGTG
GGTACAACCG TCCTGATCCT GCTGGTGTTC TACGTCCTTT TGCTGATCGT CTTCTCGTTC
CTGTCGCCGT TCTTCATGAC GGTGCGCAAC ATGACATCCA TCAGCTCAAA CATCGCATTG
ATCGGGCTTA TGGCGGCGGC GGGCACCCCG TTGATCATCG CCGGGGGTCT GGATCTGTCG
GTTGCGGCGG TGGCCGGTCT GACCGGGGTG ATCATCGCAT TGCTGCACGC CGCCGGGCTT
CCGATCTGGG TCGCGGTATT GTGTGCCATC GGCGTGGCGG TGGGGATCGG CATCGTGAAC
GGCGTGCTGG CCACCTATCT GCGGCTGAAC CCGTTGATCG TCACACTGGC GACAATGTCC
ATTGTCAGCG GCGTCTCGTT GATCCTGACC GGAGGCCTGA CCAAGCCGCT TCTGGTGGAT
GGATTCAACT GGATTGGACA GGGGCGCGTT CTGGGTATCC CCGTGCCCGC CCTGTTGATG
CTGGCGGTCT ATGGTATGCT ATGGCTGGTC CTGCAGAAAA CCCATTTCGG ACGCCACGCC
TTTGCCGTCG GGGGCAATCC GGATGCCAGT CGTCTGATCG GCCTGCCGGT CAACCGGACG
CAGGTGTCGC TTTACGTGAT GTCGGCTGTA TCGGGTGCCA TTGCAGGCAC GGTCCTTGCG
GCCATGTTGG GGGCGGCGGC GCCCAATGCG GCGGGGCCGC ATCTGCTGAC TGTCATCGCC
GCGATCATTC TGGGGGGCAC ATCCCTGCAA GGCGGGCGCG GATCCGTGTG GGGTACGCTG
GTCGCCGTCC TGATCCTTGG GACGCTCAAC AACGGGCTGA CCCTGATGAA TGTCACCAGC
TTCTGGCAGG ATGTGACCCG GGGTGTCGTT CTGATCCTGG CGGTGGGCTT TGACGGCGTG
CGACAGCGCA TGGCGTGA
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| Protein sequence | MSSPSPSQSI FTRLFGGSGV GTTVLILLVF YVLLLIVFSF LSPFFMTVRN MTSISSNIAL
IGLMAAAGTP LIIAGGLDLS VAAVAGLTGV IIALLHAAGL PIWVAVLCAI GVAVGIGIVN
GVLATYLRLN PLIVTLATMS IVSGVSLILT GGLTKPLLVD GFNWIGQGRV LGIPVPALLM
LAVYGMLWLV LQKTHFGRHA FAVGGNPDAS RLIGLPVNRT QVSLYVMSAV SGAIAGTVLA
AMLGAAAPNA AGPHLLTVIA AIILGGTSLQ GGRGSVWGTL VAVLILGTLN NGLTLMNVTS
FWQDVTRGVV LILAVGFDGV RQRMA
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