| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3085 |
|---|
| Symbol | |
|---|
| ID | 3935556 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 3119232 |
|---|
| End bp | 3120131 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637905456 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_511027 |
|---|
| Protein GI | 89055576 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3246] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.393208 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAATA TCATCATCGA GGCGCGCGTG AATGAACTGG CCACGCGGAT CGGTAACCCC
CATGTTCCCT TCCTGCCCGC CGAGGTTATT GCCGATGCGA AGGCCTGCCA TGATGCCGGC
GCGTCGATCT TCCACTTTCA CGGACGTAAC GAAGACGGCA CACCGTCCCA CGATCCGAAT
TTCTATCTGG AAACCAACGC AGGCATCCGT GCGCAGTCTG ACATTCTGAT CCATCCGACG
CTGGGATATG TGGCGAACGA TACGGACGCG AAGGGGCGCT TTGCTGCCAT CGAACAGATG
ATGCAGTCAG CGGAGACGGC TCCTGATTTC GCACCGATGG ATACCGGAAG CGTCAATGTG
GATTGGTGGA ACCCGGACGA GGGAAAGTAC GATACCACTG AGTTGATCTA TAAGAACTCC
ACCGGCACGT TGATGTATTT TGCAGACCGC ATCCGCCACT ACAACCTGAC GCCTTACCTC
GTGAGCTGGA ACGTCAGCTT TACCCGCCAG ATTGAGCAGT TCCTGAAAAT GGGTGTGCTC
GACGCCCCGG CCTACATCTG CTTTTGCATG ACCGATGAGA TCATCTTTGC CGGTCATCCC
GGCACAGAGG CAGGGCTTGA TGCCCACACC GCTTTCTTGC CGCCGGAGTT CGAGACGGTC
TGGACGGTCG TGAACTACAA GGGCGACCTG TTCCAACTGA CCGAGAAGAT CATCCGGACG
GGTGGCCACA TCTCCATCGG CCTGGGTGAT TACGCCTACA TGGACGGCTC GCGGCACATG
ACGAACGCTG AAGTGATCGC AAAGGTTGCT GATCAGGCCC GGCGCCTCGG GCGCGAACCT
GCGAGTGTCG CGGAGACACG CGAAATTCTC AACATGAAGA CCCCTCGCAT CGCGGCCTGA
|
|---|
| Protein sequence | MQNIIIEARV NELATRIGNP HVPFLPAEVI ADAKACHDAG ASIFHFHGRN EDGTPSHDPN
FYLETNAGIR AQSDILIHPT LGYVANDTDA KGRFAAIEQM MQSAETAPDF APMDTGSVNV
DWWNPDEGKY DTTELIYKNS TGTLMYFADR IRHYNLTPYL VSWNVSFTRQ IEQFLKMGVL
DAPAYICFCM TDEIIFAGHP GTEAGLDAHT AFLPPEFETV WTVVNYKGDL FQLTEKIIRT
GGHISIGLGD YAYMDGSRHM TNAEVIAKVA DQARRLGREP ASVAETREIL NMKTPRIAA
|
|---|
| |