| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3084 |
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| Symbol | |
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| ID | 3935555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3118189 |
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| End bp | 3119190 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637905455 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_511026 |
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| Protein GI | 89055575 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.659506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.402986 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGATGA AGACCCTCAA ATTGGGCACG GCGCTTTGTC TTTTGGCGGC ACCAGCTTTC
GCGGACGATT TCCGTATGCA GACATTTCTC GGCGCAACCG CTGCGACCAC GACGGCGTTC
GAGGATATGG CCGCCGAGTT GGCGGAAGCC ACCGATGGCG CCATAGACAT TCAGGTTTTT
CCGGCGGGCT CCGTTGTGGG CGCGACGGAC ACTATAGATG CCATCACCAA CGGCCTGCTG
GACGGGCAAT ATACCGGCCC CACGTTTTTT GCGGGCCTTG ATCCGGCCTT CGCGGTTTTT
GGCGACACGT TGTCAGCCTA TCCGGATGTC GCGACCCGGG CGCGGTGGTT CAGCGAAGGG
GGCGGTCTTG AGTTGGGACA GGCCCTGTAT GCGGATTACG GGATGCATCT GATCTGTGTC
ATCCATTGGC CGGGAGAGCA GATCCCCTCA ACGGTTCCGA TCCGGTCAGT TGCGGATTTT
GACGGGATCA CAATCCGCGC GCCGGGTGGC TTGCCCTCGG ACCTGCTGAC CCGCGCGGGT
GCGCAATTGG TGAACCTGTC ACCCGGTGAC GCGATCACCG CGCTGGAAAC CGGCGCGCTT
GATGCCTCGG ATCTGGCAAA TGTCGGCCTG AACATGGCCT TTGGAATGCA CCAGAACGCG
CCCTATTCGA TCCGCGCGGG CCATTCTATG CCGGTGACGG AGATGTCGGT GTCGATGGAA
CGTTGGGACG CGCTGTCTGC CGATCATCAG GTCGCGTTCA CACAGGCCTG TGAGGGGCTG
TCGACCACTC TGGAAACCGT CCTTGGCGAC CAGGAGGAGG CCGCGATTGC AGAGGCGCGC
GATGATCTGG GGGTCGAGTT CATCGAGTTC AGCGATGATG ATGCCGCCAC CTTCCGCGCC
ATGTTGCAGG AGGTGTGGGA CGATTGGGGG GCCCGCAATG AGCGCGCGGG CCAGATCGTG
GAAAGCCACC GTGCTTTCCT GAGTGAACTG GGCATCATGT AG
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| Protein sequence | MMMKTLKLGT ALCLLAAPAF ADDFRMQTFL GATAATTTAF EDMAAELAEA TDGAIDIQVF
PAGSVVGATD TIDAITNGLL DGQYTGPTFF AGLDPAFAVF GDTLSAYPDV ATRARWFSEG
GGLELGQALY ADYGMHLICV IHWPGEQIPS TVPIRSVADF DGITIRAPGG LPSDLLTRAG
AQLVNLSPGD AITALETGAL DASDLANVGL NMAFGMHQNA PYSIRAGHSM PVTEMSVSME
RWDALSADHQ VAFTQACEGL STTLETVLGD QEEAAIAEAR DDLGVEFIEF SDDDAATFRA
MLQEVWDDWG ARNERAGQIV ESHRAFLSEL GIM
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