| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3064 |
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| Symbol | |
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| ID | 3935535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3097423 |
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| End bp | 3098712 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637905435 |
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| Product | type III effector Hrp-dependent outers |
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| Protein accession | YP_511006 |
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| Protein GI | 89055555 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.174455 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGTGC CGCGCCTCGC CTGGTATGGC GACGATTTCA CCGGGTCCGC CGCCGTCATG
GACGAGCTGG CGCAGGCCGG GCTGACGGCC GTTCTGTTCA CACGGATGCC CGACGATGCA
ACTGCCACCC GCTTTGCGGG ATACGATGCC GTCGGTCTCG CCGGAACCGC GCGGACCCGC
GGGCCCGCCT GGATGAGACG GGAATTGCCG GGCGTCTTCG ACTGGATGGA AAGGACCGGC
GCTGACCATC TGCACTACAA GATCTGTTCC ACCTTCGACT CGTCAGCCGA GCTTGGGTCG
ATCGGCCTTG CTGCCGAGAT CGGTTTGGCG CAGCTCGGCG GATGGGCGCC CTGCCTGACC
GCCGCACCGT CCATGGGGCG ATGGCAGTGT TACGGGACGC TGTTCGCCCG CGGACCGGAC
GGCGCCGCGC ACCGGCTCGA CCGACACCCG GTGATGCGCC AGCATCCTTC GACGCCCATG
GCAGAGGCCG ATCTGGCGCG CCATCTTGCG GAGCAGACTG ACCTACCCAT CGGCTTGCTC
ACGCTCGACC AGCTGGCGGG TGGGGTGCCG GAGCGGGATC GTGATGGGAT CGTTTTGCTC
GACGCCCAAA GAGAGGCCGA CATGGTGCTG GCAGGCGCGA TCCTAGCGGA TAATGGTGCG
GGGTTATTGC TTGGCTCCCA AGGGGTTGAA ATGGCATTGA TCGCCCATTG GCGGGCGGCC
GGGCGGCTGG GTTCCGAGCA ACCGCGCACC CCACTTCGAC CGGCGCGTCT GGCGGTGGTT
TCGGGCTCTG TCTCAGAGGG AACCGCGGCG CAGATCACAG CGGCGAAGGC GGCCGGTTTT
GCAACATTCG CGCTCGACAC CGCGTCGCTG CTCGACGGGG CGGTGCCGGA TTTGACCAAA
GCCACCGCTG CCCTGCGCCA GGGGGCGTCA ATCCTGTGCC ACACGGCATT GGGGCCGCAG
GACCCCCGCC TGTCCGCGAC ACGCGACCGA CAACGATCGC TTGGCCTTTC ACCGGAAGAC
ACGGCGGAGC GGATTGGCAC GGCCCTTGGT CAGGTTTTGG CCCGGCTTGC GCCGACAGCC
GAACGACTGG TCGTCGCCGG GGGCGACAGT TCAGGCTTCG TGACCACGGC GCTTGGCGTG
GATGCGTTGA CGGCTCTTGC TCCGGTGGAC CCCGGAGCGC CACTGATGCG CGTTCATGGC
GGAGCAGCCG ATGGGGCGGA GCTGGTGTTG AAAGGGGGTC AGATGGGCGC GCGCGATCTC
TTTGTTCGGC TGCGGAATGG CGACCGCTAG
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| Protein sequence | MTVPRLAWYG DDFTGSAAVM DELAQAGLTA VLFTRMPDDA TATRFAGYDA VGLAGTARTR
GPAWMRRELP GVFDWMERTG ADHLHYKICS TFDSSAELGS IGLAAEIGLA QLGGWAPCLT
AAPSMGRWQC YGTLFARGPD GAAHRLDRHP VMRQHPSTPM AEADLARHLA EQTDLPIGLL
TLDQLAGGVP ERDRDGIVLL DAQREADMVL AGAILADNGA GLLLGSQGVE MALIAHWRAA
GRLGSEQPRT PLRPARLAVV SGSVSEGTAA QITAAKAAGF ATFALDTASL LDGAVPDLTK
ATAALRQGAS ILCHTALGPQ DPRLSATRDR QRSLGLSPED TAERIGTALG QVLARLAPTA
ERLVVAGGDS SGFVTTALGV DALTALAPVD PGAPLMRVHG GAADGAELVL KGGQMGARDL
FVRLRNGDR
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