| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3060 |
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| Symbol | |
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| ID | 3935531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3092469 |
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| End bp | 3093326 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637905431 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_511002 |
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| Protein GI | 89055551 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000026744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.242245 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAAT CGCTGCGGGA GCAAGGCATT GAGGTTATCG AAGTAAATGC GAACGAGGAT
GCCAACCGGC AGCTCGAACA GATCCGTGAT TGCATCACGC AGGAAGTCGA TGGGATCATC
ATTATCCCCC AGGATGGCGA GAGTGTCATA GCGATGATCG AAGAAGCCAA CGTGGCCGAG
ATCCCGGTCG CGGTCTTCAA TCGCCCGCCC AACCCTGACA ACCCCCATGA CGCCATCGTC
GTGGTCGCAG ACAACGTTGC CATCGCCGAG GCCGCCGTCG AGCACCTTGC CGAACAGGTT
CGCGCCCTTG ATCTGGGGCG TCCAGCTATT CCGCTCATCA TGGTGGGAGC GCTGGCTGAC
ACCAACGCAA TCGGACGTCG CGAAGGGTTC TTCAATGTCG TGAACGCGAA CCCCGACCTT
TTCGGCGAGG CCATTGAAGT GCCGACGGAA TGGGACGCGT CCGTTGCGCT TGCCAACCTT
GAATCGGCCC TCCAGGCGAA TCCAGAAGTG GACATGATCT TCACATCGTC AGACTTCCTG
TTTCCGCAGA TCCGTGCTGC TCTTGCGCAA CGGGGCCGTT GGGCGCCAAG CGGTGATCCC
GGCCACATGA TCCTCGGCGG GCTCGACGGG GACGTCACCG CCTGTGAATT GATCAAGGAA
GGCTATGTCG ATTCGACCGG GGTGCAGGAC CTCTTTTTCG AAGCGGATGC GACCGTGACG
GCGCTTCTGG AGGCGATCGC AGAGGGGGAC ACCAGCCCGA ACGAGATCAT TCGCGATGAG
GGGTTTGCGT TGACCCAGGC CAATATCGGA GAGCGTGAGA TGGACATGTG GGGCTGTGTC
CTGCTGGCCG AGCAGTAA
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| Protein sequence | MTQSLREQGI EVIEVNANED ANRQLEQIRD CITQEVDGII IIPQDGESVI AMIEEANVAE
IPVAVFNRPP NPDNPHDAIV VVADNVAIAE AAVEHLAEQV RALDLGRPAI PLIMVGALAD
TNAIGRREGF FNVVNANPDL FGEAIEVPTE WDASVALANL ESALQANPEV DMIFTSSDFL
FPQIRAALAQ RGRWAPSGDP GHMILGGLDG DVTACELIKE GYVDSTGVQD LFFEADATVT
ALLEAIAEGD TSPNEIIRDE GFALTQANIG EREMDMWGCV LLAEQ
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