| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3057 |
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| Symbol | |
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| ID | 3935528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3088842 |
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| End bp | 3089828 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637905428 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_510999 |
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| Protein GI | 89055548 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.129812 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.382796 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCC AAGGCGCCAC GGTTCTGGGG CTGAAAGCAA CGCCCTTCAT TCTCTTTGTC
CTGATCTTTG TCGGCTTCGG AATCGCGTCC GAACCATTCC TGTCCGTCCA GAGCTTCGAG
AATATCGTCA AGCAGGCAAG CTTCATCGGC ATCGTCGCGA TCGGCCTGAC CTTCGTGATG
CTGACAGGCG GCATCGACCT GTCGGTTGGC ACGAACATGT ATGTCTCGAC GGTCGTGGCC
GGACTGCTCA TGGCAGAATA CGACGTGTCG CCATGGCTTG CCTTTCTCGG CTGCGTGGCA
ACCGGCGTCG CCTTCGGCGC GGTGAATGCC TTTCTGATCG TGCGTCTGGG CATGGTGCCG
TTCATCGTCA CGCTTGGCAC CCTTGTGGCG GGCCGCGGGC TTGGCCTGCA ATTGACCGAG
TCCCGTGGCG TCATGCTGCC CAACGACATG CTGCGCTTCG GCTCGGGCGA CACCTTCGGG
GTCCCGAACC CGATCCTCGT TTTTCTGATC GTGGCGGTGT TTGCGCAGAT CCTGCTGTCG
TCAACGCCCA TCGGGCGGCA CATCTACGCC GTGGGCGCTG ATGCAAAGGC CGCGGAAAAG
GCCGGGATTG GCAAGGGCCG GACGGTGGCT GCGGCCTACC TGATCTGTGG CGGCTGTGCC
GGATTGGGCG GTTTTGTCGG CGTGTCGCAG CTTGGGATCG TTAATGCCGG ATTCGGTGAG
TTTGCGGAGC TTTTGGCCAT TGCGGCTGCG GTTCTTGGTG GCACGTCCCT TTTCGGCGGT
GTGGGCAGTG TGTTGCCGGG GACGGTCCTG GGGGCCGTCT TGATCCAGAT GGTCCAATCG
GGCCTCGTGT TTCTCCGCGT CGACATCTAT CTCCAACCGC TGATCCAGGC CTTCATCATC
TTTGTTGCCG TGATCCTCGA CAGTGTCAGA AACGCTATTC TCGGGCGCAT GGCACGGCGC
ATGATCAGGG TTGAGGGAAA AGACTGA
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| Protein sequence | MTAQGATVLG LKATPFILFV LIFVGFGIAS EPFLSVQSFE NIVKQASFIG IVAIGLTFVM
LTGGIDLSVG TNMYVSTVVA GLLMAEYDVS PWLAFLGCVA TGVAFGAVNA FLIVRLGMVP
FIVTLGTLVA GRGLGLQLTE SRGVMLPNDM LRFGSGDTFG VPNPILVFLI VAVFAQILLS
STPIGRHIYA VGADAKAAEK AGIGKGRTVA AAYLICGGCA GLGGFVGVSQ LGIVNAGFGE
FAELLAIAAA VLGGTSLFGG VGSVLPGTVL GAVLIQMVQS GLVFLRVDIY LQPLIQAFII
FVAVILDSVR NAILGRMARR MIRVEGKD
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