| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3053 |
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| Symbol | |
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| ID | 3935524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3084602 |
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| End bp | 3085594 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637905424 |
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| Product | oligopeptide/dipeptide ABC transporter, ATP-binding protein-like |
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| Protein accession | YP_510995 |
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| Protein GI | 89055544 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.251926 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAATG CGGAACAACA AGATGCACTG CTATCCGTCC GCGACCTGTC CGTCGCCTTT
TCGACGCCCG ATGGCACGGT GCGGGCTGTC AACAAAATCT CATTCGACCT TGCGGCCAAG
GACACACTGG CCATCGTCGG CGAAAGCGGG TCCGGCAAGA CACAGCTCGC CTTCGCGATC
CTCGGGCTTC TGGCGCGTAA CGGCACGTCC ACTGGCTCGG TCATGCTGGA GGGGCAGGAG
ATCCTGAACC TGCCGGAGCG CAAGCTGAAT GCCATTCGCT CCGATCGTAT TTCGATGATT
TTCCAGGATC CCATGACCTC CCTGAACCCG TATCTGCGGA TCGGCACGCA GATGGCGGAG
GTGCTGCAAC TCCACAAAGG CATGTCGAAA ACCGAAGCGC TGGACGATTC CGCCAAGATG
CTCGACGCCG TACGCATCCC CGATGCCAAA AGCCGTCTGC GCATGTATCC CCATGAGTTT
TCCGGCGGGA TGCGCCAACG GATCATGATC GCCATGTCGC TGCTCTGCCG CCCCAGGATC
CTGATCGCCG ATGAACCCAC CACCGCCCTG GACGTGACGG TACAGGCGCA GATCATGGAC
CTGCTCTCAG ATATCCGCGA GGATTTTGGC ACTGCGGTGA TCCTGATCAC CCATGATCTT
GGCATCGTTG CGGGGGCCAG CGCGCGCACA ATGGTCATGT ACGGTGGAAG GGTGATGGAG
ACCGGGCCGA CCGATAAGGT GTTCGCCGAA CCCTCCCATC CCTACACCTC CGGTCTGCTT
GCCGCCGTAC CGCGCCTTGA TGTGCCGCAA GCCGCGTTGC AAACCATACC GGGCGATCCG
CCGGACCTGA TGAACATCCC CGACGGATGC CCGTTCTCGC CGCGCTGCCC GCTGGTCCAC
ACGTCCTGCC ATGACCACAT GCCGTCACTT GATCAGTTCG ACGCGGATCG CCTGCGCGCC
TGCCATGCCG CGCGAGAGGA GGTGTCGCCA TGA
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| Protein sequence | MINAEQQDAL LSVRDLSVAF STPDGTVRAV NKISFDLAAK DTLAIVGESG SGKTQLAFAI
LGLLARNGTS TGSVMLEGQE ILNLPERKLN AIRSDRISMI FQDPMTSLNP YLRIGTQMAE
VLQLHKGMSK TEALDDSAKM LDAVRIPDAK SRLRMYPHEF SGGMRQRIMI AMSLLCRPRI
LIADEPTTAL DVTVQAQIMD LLSDIREDFG TAVILITHDL GIVAGASART MVMYGGRVME
TGPTDKVFAE PSHPYTSGLL AAVPRLDVPQ AALQTIPGDP PDLMNIPDGC PFSPRCPLVH
TSCHDHMPSL DQFDADRLRA CHAAREEVSP
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