| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3052 |
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| Symbol | |
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| ID | 3935523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3083647 |
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| End bp | 3084600 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637905423 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_510994 |
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| Protein GI | 89055543 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.367551 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGCCA CACGCCAAAC CGCCGACGCG CTTGCGACGT CTGAACCGGC CGGGCCGCCA
CGGTCCCTCT GGGCCGATGC GCGCGCACGT TTCTCGCGCA ACCGCGCGGC CTTGGCCGGG
TTGATCGTGC TGGGATTGGT CGGAGCCTTC GCACTCTTCG GTCCGCTGAT AGCACGCAGT
TCGATCGAGA CAATTAACTG GTCGATCCTG GGCAACGTCG ACAATGCAGG CGGGCCTTGT
TTCTTCTCGG GGCCCGACAA CGAGATCCCC CCCTGCGCCG AGACCGGCCT TTGGTTCGGC
ACCGATGCCC AGGCCCGCGA TCTGTTCGCG CGCACCGTGC AGGGCACGCA GATCAGCCTG
ATGGTCGGCA TCGTCGGCGC GCTGATCGCC GTGGTCGTCG GCACGCTTTA CGGCGCCATC
GCCGGCTATT ACGGGGGCCG CGTTGATAAT GTCATGATGC GCATCGTCGA TGTGCTGATG
TCTATTCCCT ATATGTTCGT TCTGATCCTG CTGCTGGTCA TTTTCGGGCG CTCCATCCTG
ATGCTGTTCA TCGGCATCGG GCTGATCTCC TGGCTGGACA TGGCGCGGAT CGCGCGGGGC
CAGACCCTGT CGCTGCGCGG CAAGGAATTC GTGGAAGCCG CAATCGCCAC CGGCGTGCCA
CCCTTCCGCA TCATCCTGCG CCACATCGTG CCCAACCTGC TGGGGGTCGT GATCGTCTAT
GCCACGCTAT TGGTCCCCTC CATGATCATC TATGAGAGCT TCATCTCCTT CCTCGGCCTC
GGCGTGCAGG AGCCGCTGAC GTCCTGGGGT GCATTGATTA ACGATGGCTC AGACCAGATG
CGGCAGGGCC TTTGGATGCT GATGTTCCCG CTGTTCTTCT TTGTAGTCAC CCTGTTCGCC
TTCTTCTTCG TCGGCGACGG GTTGCGCGAC GCGCTCGATC CAAAGGATCG GTGA
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| Protein sequence | MLATRQTADA LATSEPAGPP RSLWADARAR FSRNRAALAG LIVLGLVGAF ALFGPLIARS
SIETINWSIL GNVDNAGGPC FFSGPDNEIP PCAETGLWFG TDAQARDLFA RTVQGTQISL
MVGIVGALIA VVVGTLYGAI AGYYGGRVDN VMMRIVDVLM SIPYMFVLIL LLVIFGRSIL
MLFIGIGLIS WLDMARIARG QTLSLRGKEF VEAAIATGVP PFRIILRHIV PNLLGVVIVY
ATLLVPSMII YESFISFLGL GVQEPLTSWG ALINDGSDQM RQGLWMLMFP LFFFVVTLFA
FFFVGDGLRD ALDPKDR
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