| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3051 |
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| Symbol | |
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| ID | 3935522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3082711 |
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| End bp | 3083634 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637905422 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_510993 |
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| Protein GI | 89055542 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.366148 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGCCT TTATCCTCAA ACGCATTCTC GTCGCGATCC CGGTTCTGCT GATCCTGATC
GTGCTGACCT TCGTGCTGAT GTATGCAGCC CCCGGCAGTC CGTTCGCGTC CGAACGCGGC
GTGCCGCCTG CTGTGTTGGC GAATCTGGAG CGCGAATACG GGCTGGACCG TCCGTTTCTG
GCGCAGATCG GCACCTATGT CTGGAACATC GTCACCCAAT TCGACTTCGG GCCGTCCTTC
CAGTACCGCG ACCAGGACGT CAACGACCTG ATCGAACAGG GCTTCCCCGT CACTCTTACG
TATGGGTTCT GGAGCTTTCT GGTGGCCATC CTCGTGGGCG CGCCCCTGGG GATCTTGGCC
GCGATCCGCC ATAACTCCGC GCTGGATTAT GCCGCTGTCG GCATTTCCGT CGGGGCGCAG
GTGTTGCCCA ACTTCGTGCT GGCTCCAATC CTGGTGCTGA TCTTCACCGT CTGGCTGGGG
TGGCTGCCCG GTGGCGGCTG GCAGGGCGGA CAGATCGAAT ACGTGATCTT GCCGGTTATC
GCCCTGTCGA CCTCCTTCAT GGCGTCCATC GCGCGCATCG CCCGCGCCTC TATGCTGGAG
GTGATGACCT CCAACTTCAT CCGCACCGCA CGCGCCAAGG GCCTGCCGGA GCGCACTGTC
GTGCTGCGCC ATGCCTTGAA ACCGGCGTTG TTGCCCGTGA TTTCCTACCT TGGCCCGGCC
TTCGTGGGCA TGATCACCGG GTCCGTGGTC ATTGACCTCT ACTTCTCCAC CGGCGGCATC
GGGCAGTTCT TTGTCGCCTC CGCGCTGAAC CGCGATTACG GCGTGATGAT GGGCATCACC
GTCCTGCTGG GGGCGCTGAC GATCTTCTTC AACCTTCTGG TCGATATCCT CTACGCATGG
ATCGACCCGA AGATCCGGTA TTAG
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| Protein sequence | MAAFILKRIL VAIPVLLILI VLTFVLMYAA PGSPFASERG VPPAVLANLE REYGLDRPFL
AQIGTYVWNI VTQFDFGPSF QYRDQDVNDL IEQGFPVTLT YGFWSFLVAI LVGAPLGILA
AIRHNSALDY AAVGISVGAQ VLPNFVLAPI LVLIFTVWLG WLPGGGWQGG QIEYVILPVI
ALSTSFMASI ARIARASMLE VMTSNFIRTA RAKGLPERTV VLRHALKPAL LPVISYLGPA
FVGMITGSVV IDLYFSTGGI GQFFVASALN RDYGVMMGIT VLLGALTIFF NLLVDILYAW
IDPKIRY
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