| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3040 |
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| Symbol | |
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| ID | 3935511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3066280 |
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| End bp | 3067638 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637905411 |
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| Product | putative nitrate transport protein |
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| Protein accession | YP_510982 |
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| Protein GI | 89055531 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0757013 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.570459 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGGA TTATCGCAGC CCTCTTTACC ACCACAGCGC TCGCAGGCCC GCTTGCAGCA
CAAGACCTCG AAATCGACGA GCTGACCTTC GGCTTCATCA AACTCACCGA TATGGCGCCG
CTCGCGATTG CCTATGAGAT GGGCTTTTTC GAGGACGAAG GCCTCTTCGT TACGCTTGAG
GCGCAAGCCA ATTGGCGGGT CCTTTTGGAC GGGGTGATCG ACGGTACGCT GGACGGCGCG
CACATGCTCG CGGGTCAACC GATTGCGGCT ACAATCGGCT ACGGCACGCA GGCCAATATC
ATCACCCCAT TCTCCATGGA CCTCAACGGC AACGGCATCA CGGTCTCCAA CGAGGTCTGG
GATTTGATGC GCCCGCACAT CCCCTCTATG GACGATGGCC GCCCGGTTCA TCCAATCAGC
GCCTCGGCCC TCGCGCCCGT CGTCGAGCAA TACCGCCAAG AGGGCACGCG CTTTGACATG
GGCATGGTCT TCCCCGTCTC CACCCATAAT TACGAGATCC GCTTTTGGCT GGCCGCCGGT
GGCCTGCACC CAGGTTTTTA TAGCCCTGAC GACATCACCG GCACGATTGA CGCGGATGTT
TTCCTGTCTG TCACGCCCCC TCCGCAGATG CCTGCGACGC TGGAAGCGGG GACTATTTTT
GGCTACGCGG TGGGGGAGCC CTGGAACCAG CAGGCCGTCC AACGGGGCAT CGGTGTGCCG
GTGATCACCG ATTATCAATT GTGGCCCAAC AACCCCGAAA AGGTCTTTGG GATTACCGAA
GACTTCGCCG AACAGAACCC CAACACCACG CAGGCCATCG TCCGCGCGCT GATCCGGGCC
GGCATGTGGC TGGACGAGAA TGACAACGCC AACCGTGCGG AAGCCGTGTC GATCCTGTCC
TACCCGGAAT ACGTGGGCGC AGACGAAGAC GTCATCGCGG CGTCCATGAC TGGTACGTTC
GAATTCGAGC CCGGCGACGT GCGCGACATC CCCGATTTCA ACGTCTTCTT CCGCTACTAC
GCGACCTATC CCTACTATTC GGATGCGGTC TGGTACCTGA CGCAAATGCG CCGCTGGGGC
CAAATCCCCG AGGCCATGTC CGATGAGTGG TACCACGAGG TTGCGGCGCA AGTGTACCGC
CCCGACATCT ATCTGGAGGC CGCGCGCAGC CTGGTCGATG ACGGCTTGGC GGCGGAGGCC
GACTTCCCCT GGGACACCGA CGGCTTCCGT GACGTTGAGA CCGAGATGAT GGGCGGCGTG
CCCTACGACG GGCGCACGCC CAACGCCTAT ATCGACGCGC TGGAGATCGG TCTGACCGGC
GACGAAGTGG TCGTTGACGG GGCCGTCACG GGCGGCTGA
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| Protein sequence | MNRIIAALFT TTALAGPLAA QDLEIDELTF GFIKLTDMAP LAIAYEMGFF EDEGLFVTLE
AQANWRVLLD GVIDGTLDGA HMLAGQPIAA TIGYGTQANI ITPFSMDLNG NGITVSNEVW
DLMRPHIPSM DDGRPVHPIS ASALAPVVEQ YRQEGTRFDM GMVFPVSTHN YEIRFWLAAG
GLHPGFYSPD DITGTIDADV FLSVTPPPQM PATLEAGTIF GYAVGEPWNQ QAVQRGIGVP
VITDYQLWPN NPEKVFGITE DFAEQNPNTT QAIVRALIRA GMWLDENDNA NRAEAVSILS
YPEYVGADED VIAASMTGTF EFEPGDVRDI PDFNVFFRYY ATYPYYSDAV WYLTQMRRWG
QIPEAMSDEW YHEVAAQVYR PDIYLEAARS LVDDGLAAEA DFPWDTDGFR DVETEMMGGV
PYDGRTPNAY IDALEIGLTG DEVVVDGAVT GG
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