| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3033 |
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| Symbol | |
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| ID | 3935504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3055112 |
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| End bp | 3056443 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637905404 |
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| Product | hypothetical protein |
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| Protein accession | YP_510975 |
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| Protein GI | 89055524 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0153643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGACTG ACAACCGCAT CGCCTGGACC GAGGGCATGT TCCTGCGCGT CCAGCATTTC
CAGCAGGCCG ACCGATGGAC GGAGCGTCTT GTGCGTGACC GCACGGGGGC GCTGACACCC
TATCCCTGGG GCCTGACGCA GATCGCGCTG GACCGCTCGG CCCTTGGCGT GGGGCGCGTT
GCGCTGTCTT CCGTGGCGGG TATCCTGCCC GACGGCACGC CGTTTTCCGC CCCCGATCTG
GCCGATCTGC CCGCGCCGGT TGAGCTGGCC GAGGGGTCCG GTGCCACGAC CGTCTACCTC
GCCATGCAGA TGCGCCGCAG TGGCCAGCCC GAATACGGCC CCGCCGCCCG CCCCAATGCC
CGCCACAAGC GCGAAGAATA CGAGGCCGAG GATGCCAATT CCGACACCTC CTTCACCGCT
GCCATAGATG TCGGTCGCGC GGCGCTGTCC CTCAAAACCG ATGCGGATGA GCGGGAAGGG
TTTGAATGCC TGCCCATCGC CCGCGTGGTG GAAACCCGTG CGGACCTGTC GGTCGTGCTG
GACGAGGCGA TGATCCCGCC CCTGATGATC GTCGGAGCCA ATCCGCGTCT CCATGGTTAT
CTGACTGAAA TCGTTGGCCT TCTGCGCCAC CGTGCCGCCG CCATTGCCCG TCGCATGGGC
GATCCGTCGA TCCGGGGCGC GGCCGAAATC GGCGACTACA TGATGCTTCA GGCGCTCAAC
CGCGCCACGC CTTTGATCGC CCATCTGGAA GGCCAGGCTG GCCAAATCCA CCCCGAAGGT
GCGTTTCGCC AATTGGTGGC GCTGGCCGGT GAGTTGGCCA CCTTCACCGC GTCTGACAAC
GTCGCGCCCG ATATGCCCCA GTACCTTCAC ATGGACCCGG AAGCGACCTT CGCCCCGGTG
ATGGATGAAC TCCGCCGTTC GCTGTCTGCG GTGCTGGACC AATCCGCCAC ACCGATCCCG
CTGGAACTGC GCCGCCACGG CGTGCGTGTC GGTATGATCG CCGATGCGGG TCTCAAACAC
GACGCCTCCA TGGTGCTGGC CGCCCGTGCC GATCTGCCCG CCGAACAGCT GCGTCGTGCC
CTGCCGAACC AGATCAAGAT CGGGCCGGTG GAACGCATCG CCGAACTGGT CAACGTCGCC
CTTCCGGGCA TCCCCGTGCG GCCCCTGCCG GTGGCCCCGC GCCAGCTGCC CTACCGCGCC
GGGTCCGTCT ATTTTGAACT GGACACATCC GATGATCTCT GGCGGACCAC GTCCGACGGA
GGGGCCATCG CCATCCATCT GGCCACCGAT ATTCCCGGCC TTGATCTTGA GCTGTGGGGG
ATCCGGGGAT GA
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| Protein sequence | MKTDNRIAWT EGMFLRVQHF QQADRWTERL VRDRTGALTP YPWGLTQIAL DRSALGVGRV
ALSSVAGILP DGTPFSAPDL ADLPAPVELA EGSGATTVYL AMQMRRSGQP EYGPAARPNA
RHKREEYEAE DANSDTSFTA AIDVGRAALS LKTDADEREG FECLPIARVV ETRADLSVVL
DEAMIPPLMI VGANPRLHGY LTEIVGLLRH RAAAIARRMG DPSIRGAAEI GDYMMLQALN
RATPLIAHLE GQAGQIHPEG AFRQLVALAG ELATFTASDN VAPDMPQYLH MDPEATFAPV
MDELRRSLSA VLDQSATPIP LELRRHGVRV GMIADAGLKH DASMVLAARA DLPAEQLRRA
LPNQIKIGPV ERIAELVNVA LPGIPVRPLP VAPRQLPYRA GSVYFELDTS DDLWRTTSDG
GAIAIHLATD IPGLDLELWG IRG
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