| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3031 |
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| Symbol | |
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| ID | 3935502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3052882 |
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| End bp | 3053868 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637905402 |
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| Product | hypothetical protein |
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| Protein accession | YP_510973 |
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| Protein GI | 89055522 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.586945 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCC TCTTTGACCA GTTGGAAGCC GCGCCAGACC GCTTCGATCC CCTTACCGCC
CTGCGGCTGG CCCAGGCCGA GGCCGCACGT CGCGACCTCC CGTTGGACAT CAGGTCCGTG
CCGACCGGTG CGCTGGCCCC CACGGCCATC GCGCGTGTGA CAGCCGACGA TACCGCAATC
CGGGTGGAGG CCGCGTTCGC CGGATTGACC GGGCCCCTGT CACCGTTGCC GCCCGCCTGG
ACGGAACTGG CCGCGGTGGA CCGCCGTCGC CGGGCGGGCG GATTGTCGGC GTTTCTGGAC
CTCTTCTCCG GCCGGCTGAC GGACTTCTTC GCCCGCGCGG CGGCGAAATA CGACCTGCCC
GTGCTCCTGC AATGGACCCC GCCCGCGGCC AATCGAATGC TCACCGCGCT CAGGGCGCTG
GTCGGCACCG CCACGCCGGG GCTGCCCACG CGCGCGCCTC TTGCAACGGA CAGCGAAGCG
GTCGGCGACG CGCTTTTGTC CCACGCAGGC CTGCTGGCGC AGCGCACCCG CACCGCCACC
GGGCTTCGCG CGATGGCGTG TAGCCAACTG GGGCTGCCCG TGGAGGTCAT TCAGTTTCAC
CGGCGCTGGC GGCCAGTGCC CGTATCCGAG CAAACGCGCC TCGACGGCTC GCGCGCGCTT
GGCCGCGATG CCAGCGCCGG GGCGTGGCTG CCCGATTGCG CCGGACAAAT CCGGCTGGTT
GTGGGGCCGG TGCGCTATGC CGATTTCCTG TCGCTGGAAC TGGGCGAGCC GCGCCTGCGG
GACTTTGCCC GGCTCATGCG GTTCACCCTT GGGCCGGTGC TGGAGTTTGA CATCCAGATC
GTGCTGGATC ACCGCGACAT TCCCCAGACG CAACTTGGCG GCGATGGCCC ACCCGCGCGG
CTTGGCTGGA ACGGATGGGC CAGCAGTGGC CCCGCCACCC GCGACAGCGA CGAGGCCGTG
ATCGACGGAC GGAGGGCCGC CGCATGA
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| Protein sequence | MSTLFDQLEA APDRFDPLTA LRLAQAEAAR RDLPLDIRSV PTGALAPTAI ARVTADDTAI
RVEAAFAGLT GPLSPLPPAW TELAAVDRRR RAGGLSAFLD LFSGRLTDFF ARAAAKYDLP
VLLQWTPPAA NRMLTALRAL VGTATPGLPT RAPLATDSEA VGDALLSHAG LLAQRTRTAT
GLRAMACSQL GLPVEVIQFH RRWRPVPVSE QTRLDGSRAL GRDASAGAWL PDCAGQIRLV
VGPVRYADFL SLELGEPRLR DFARLMRFTL GPVLEFDIQI VLDHRDIPQT QLGGDGPPAR
LGWNGWASSG PATRDSDEAV IDGRRAAA
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