| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3027 |
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| Symbol | |
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| ID | 3935498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3048384 |
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| End bp | 3049781 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637905398 |
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| Product | hypothetical protein |
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| Protein accession | YP_510969 |
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| Protein GI | 89055518 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0329935 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCCC CGATGCCAAA CCTCGGGGCG GTGTTCGATA CGGTCGATCC GGCGATGGCG
CATCTGGCCG CCCGGATCGA CCGCCTGATC TTGGCGATTG ATGCGGCCCT GACACGACAG
CTGAACGCGA TTCTCGCCGC GTCCGAGTTT CGGGCGTTAG AGGCGCGTTG GCGCGCGCTT
GACCGTGTGC TGACCCATGC GGGGCGTGAT GGACAGGTGA TTGTGCGGAT CCTCAACGTG
TCATGGCGGG CCCTGTCCCG GGATCTGGAC CGGGCGGTGG AGTTTGATCA GTCGCACCTG
CACAAGTTGG TCTATGACGG TGAATTCGGG ATGCCGGGCG GTTTGCCCTT TGGCGTTCTG
GTTGCCGATT ACGAGGTCTC GGCCACCACC GACCGCGCGC GCGGCGATCA GGTAGAGACT
CTTTCGCGGC TGGCCGCAGT GGCGGCTGCC GCGTTTTGTC CAATTATGCT CGGCGCCGCG
CCGGACCTTC TGGGCGTGGA CGACTTCGAC CAGATCGCGC CCTACACGGA TTTGACGGAT
GCTGAGGGAC GCCGTGCTGA TCCGCCGATG ATCCGGTGGC GCGCGCTCCG GGATCGTGAC
GACGCCCGGT TCATTGGCCT CGTCGCGCCA CGCATCGTTC TGCGCGGGCC CCGGACGCGG
CTGTCGCCCA CCCGCGCCGA CGGGTTCACC TTTGACGAAG ATCCGCACCG CATCCTGAGC
GTCGCGGGCA GTTTTGCTTT TGCCACCACA GTGATCGCAG CCTTTCGCGC TTCTGGCTGG
TTCGCCGCGA TCCGGGGGGC TGCGCAGGAC ACGGATGGCG GCGGGCGTGT GGCGGGCTGG
CCGGGCCATG ACCTTGGCAC CGATGGCCAC AATCTCTCGC GCCAATCCCC CGCCACCCTG
CGCCTCACCG CCGCCCAGGA AGACGCGCTG ATCGCACGTG GGATCGTGCC GTTGTCCTCC
CTGCCCCTCA CGGATGAGGC GGTCTTCAAC GCCAACCCCT CGCTGCATCG GCCCACCCGC
TATGACAGCC CCGTCGCGTC CGAAAACGCG CGGATCTCGG CCATGTTGCA ATATGTTCTG
TGCACCTCGC GCTTTGCCCA TTACCTCAAG GTGATGATGC GCGAGGCCAT CGGCTCCGTC
GCGCCACCTG ATGTGATTCA GGGGCATCTG GATGATTGGC TGCGCGGATA CTGCCTTGGC
AATGAGGACG CGGGCGCAGA GCTGAAGGCC GAATATCCCC TGCGCAATGC GGGCGTGGAG
GTCACGCCGA TCCCCGGCAA GCCCGGTGCC TTTGCCGCGC GGATACACCT GCAGCCGCAT
TTCCAACTCG ATGACATATC GACCAGTTTC CACCTTGTCT CCGAGGCCCC GGCGGGCTTG
GAAAGGACCT CTGCGTGA
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| Protein sequence | MTAPMPNLGA VFDTVDPAMA HLAARIDRLI LAIDAALTRQ LNAILAASEF RALEARWRAL
DRVLTHAGRD GQVIVRILNV SWRALSRDLD RAVEFDQSHL HKLVYDGEFG MPGGLPFGVL
VADYEVSATT DRARGDQVET LSRLAAVAAA AFCPIMLGAA PDLLGVDDFD QIAPYTDLTD
AEGRRADPPM IRWRALRDRD DARFIGLVAP RIVLRGPRTR LSPTRADGFT FDEDPHRILS
VAGSFAFATT VIAAFRASGW FAAIRGAAQD TDGGGRVAGW PGHDLGTDGH NLSRQSPATL
RLTAAQEDAL IARGIVPLSS LPLTDEAVFN ANPSLHRPTR YDSPVASENA RISAMLQYVL
CTSRFAHYLK VMMREAIGSV APPDVIQGHL DDWLRGYCLG NEDAGAELKA EYPLRNAGVE
VTPIPGKPGA FAARIHLQPH FQLDDISTSF HLVSEAPAGL ERTSA
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