| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3024 |
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| Symbol | |
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| ID | 3935495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3045161 |
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| End bp | 3046240 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637905395 |
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| Product | ImpA-like |
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| Protein accession | YP_510966 |
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| Protein GI | 89055515 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03363] type VI secretion-associated protein, ImpA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.504865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCTA GTGATAATTG GCGAGAAAGA ATTTCCGTGC CGGATGCGTC TCATACTGCG
AATAACGACG GAAGTGTCGG CGAAAATCCG CGCGAAACGG ATCGGGCAAT TGCGGAATAC
CGCCGACTGC GCGACGCCCG CTCGGCCGCC CGCGCCGAGG AGCGGAAACA GGAAACGGCG
GAGGCCCGTG ATCGGGCCCT GAAGGTCGCC CCGGATTGGA CCATTGTGCG CGATCTGGCC
CGGTTCCTGC TTGACGAAGT CGGGCGCGAT ATCGAGGTCG CTGTTTGGTT GATCGAAGCC
GAGACGCGGC TGGACGGCTT CGACGGGCTG GCCCGCGCGG CAGAGCAATT GGCCGACATG
ATTAACGCCC ATGGCATGGC GCTTCACCCG CAACCCGAAG ACGCTTTAGA TCGGCCGTTT
GACATGATTG CCGGTCTCAA TGGGATCGGT CGAGAGGGCA CTTTGATCCA ACCGCTTCGG
CTTGTACCAC TGGTGGCCGA GGGCGATTAT GGTCAACAGG GGTTGTGGAA TGTCACCGAC
GGCGGCGGCG CAGCGAGCGT TGCAGCAGCC TTGGCCACCA GTGGTACAGA GCAGATTTCC
CACCACTTAA ACGGTGTGGA CCGCGCGCGC CGCGCAGTCG CCCGTTGCGA TACCGCCCTG
ACCGCGCTTC TGGGGCCGGA CGCACCGCCG TTCAACAAAA TTGACGAAAG CCTGGAAGAC
GCAGCCGCCG CGATCCGCAA CCTTGCGGGC CATCTTTTGA CGTCGGAACC CGACGAGAAT
ACCGCCGATG CGACAGGTCT CGGCGAGGAT CCGCCCACCA CCTCTGCCAC GACGCAAGTA
ATGGGTAAAA TTTCATCGCG GGACGAGGCC TTCGCACAAA TGTTACGCAT TGCTGCTTAT
TTCCGCAAAA CCGAACCCCA TTCTCCAATC GCCGATACGC TTGAAACATT GGTTCGGCGT
GGACGTATGG ATTTTGTGAC TTTGCTGACG GAATTGATAC CGGACGATCA CGCCCGCCAG
GCGGTAATGA CCACCGCAGG AATAGGTTCA AAACCTCCCA CCTCCGAGAC AGAGGGCTGA
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| Protein sequence | MSSSDNWRER ISVPDASHTA NNDGSVGENP RETDRAIAEY RRLRDARSAA RAEERKQETA
EARDRALKVA PDWTIVRDLA RFLLDEVGRD IEVAVWLIEA ETRLDGFDGL ARAAEQLADM
INAHGMALHP QPEDALDRPF DMIAGLNGIG REGTLIQPLR LVPLVAEGDY GQQGLWNVTD
GGGAASVAAA LATSGTEQIS HHLNGVDRAR RAVARCDTAL TALLGPDAPP FNKIDESLED
AAAAIRNLAG HLLTSEPDEN TADATGLGED PPTTSATTQV MGKISSRDEA FAQMLRIAAY
FRKTEPHSPI ADTLETLVRR GRMDFVTLLT ELIPDDHARQ AVMTTAGIGS KPPTSETEG
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