| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3022 |
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| Symbol | |
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| ID | 3935493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3041821 |
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| End bp | 3042297 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637905393 |
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| Product | hypothetical protein |
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| Protein accession | YP_510964 |
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| Protein GI | 89055513 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
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| TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.379437 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTATCT ACATGCAACT TGACGGAATT CCTGGCGATG CAACCCATGA GACGCACCGC
AACTGGATGG ACATCGAAAC GCTGCACTGG AACGTGTCGC GCAACATGAA CACCCAGGCC
GGGTCGACCG CCAACCGTGA GGCAAGCGAG CCAACCGTGT CCGAGGTTGT TTTGACCAAA
GTGACCGACA GCTCGTCCAC CCGTCTGTTC GCCGAAGCCT GCACGGGCCG CACCGGCAAG
CTGGTGACGA TCCATCTGGT GACAACGGGC AACCCTGGCG ACACCTATGT GGAATACAAG
CTGACCAACA CGCTGGTGTC GAATTACTCC GTCGATACGT CGGGCGACCG TCCGGTGGAG
ACCATCCGCC TGAACTTCAC CCGCATGGAA GTGAAGTACA TCCCACACGA TGAGAACCAC
GCACCGCAAT CGCCGATGAT CGCCTCCTAC GATCTGACGA CAACGCGCGC GGCCTAA
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| Protein sequence | MPIYMQLDGI PGDATHETHR NWMDIETLHW NVSRNMNTQA GSTANREASE PTVSEVVLTK
VTDSSSTRLF AEACTGRTGK LVTIHLVTTG NPGDTYVEYK LTNTLVSNYS VDTSGDRPVE
TIRLNFTRME VKYIPHDENH APQSPMIASY DLTTTRAA
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