| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2989 |
|---|
| Symbol | |
|---|
| ID | 3935459 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 3008585 |
|---|
| End bp | 3010861 |
|---|
| Gene Length | 2277 bp |
|---|
| Protein Length | 758 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637905359 |
|---|
| Product | malic enzyme |
|---|
| Protein accession | YP_510931 |
|---|
| Protein GI | 89055480 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0280] Phosphotransacetylase
[COG0281] Malic enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.210734 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.136113 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGACG ACAAGAAGGA CGGATTGCGC GATGCGGCGT TGGCCTACCA TGAGCATCCG
CGTCCGGGAA AACTGGAGAT CCGGGCCACC AAACCCTTGG CCAACGGCCG TGATCTGGCC
CGCGCTTACA GCCCCGGCGT GGCGGAGGCG AGCCTTGAAA TAAAAGTGAA TTCGGCCAAT
GCGACACGCT ACACAGCCCG GGGCAACCTG GTGGGCGTGG TATCCAACGG GACCGCTGTT
CTGGGCCTTG GCAACATTGG TGCGCTGGCT TCCAAACCGG TAATGGAGGG CAAGGCGGTC
CTGTTCAAGA AGTTCGCGGG CATCGATTGT TTTGACATCG AAGTGGATGA AAGTGACCCG
GAAAAGCTGG CGGATATCGT CTGCGCGCTG GAGCCGACCT TTGGGGCGAT CAATCTGGAA
GACATCAAAG CGCCCGATTG TTTTATCGTT GAACAATTAT GTCGGGAGCG GATGGGCATC
CCCGTTTTCC ACGATGATCA ACACGGCACG GCGATCGTTG TGGGCGCGGC GGCAACAAAC
GCGCTGCGGG TGACAGGCAA GGTGTTTGAG GACATCAAAG TGGTGTCCAC GGGGGGCGGT
GCGGCCGGGA TCGCCTGCCT GAACATGTTG CTGAAACTGG GGGTGCGGCG CGAGAACGTG
TTCCTGTGCG ATATCGATGG GCTGGTCTAT GAGGGGCGCG GCGGCTCCAC CCCCCAAAAG
GACGCATTTG CGCAAGGGAC CGAAGCGAAG GGTCTGGGGG ACGTGATCGA CGACGCCGAT
CTGTTTCTGG GCCTGTCGGG GCCGGGCGTT CTGACGCCTG AGATGGTGGC CAAAATGGCC
CCAGCGCCGA TCATTTTCGC GCTGGCCAAC CCCACGCCCG AAATCCTGCC CGACGACGCG
CGTGCCGTCG CGCCAGACGC GATTATCGCG ACGGGGCGCA GTGATTTTCC CAATCAAGTC
AATAATGTGC TGTGTTTTCC ATTCATCTTC CGGGGCGCGC TGGATGTCGG CGCAACGGAG
ATCAATGACG CCATGCAGAT CGCTTGTATC GAGGGGATCG CGGCCATGGC GCGGGCGACC
ACATCTGCCG AGGCCGCCGC CGCATATAAG GGCGAGCAAC TGACCTTCGG CCCCGAATAT
CTGATCCCCA AACCCTTCGA TCCGCGCCTC TCGGCCGTTG TGGCAAGTGC GGTAGCCGAG
GCGGCGATGG CCTCGGGCGT GGCGACGCGA CCGATTGAGG ATCTGGATGC CTATCGGGCG
AAACTGAACC AATCCGTGTT CAAATCAGCC CTTGTGATGC GTCCTGTGTT TGAGGCCGCG
GCGACCGCGA AGCGCCAGAT CGTGTTCGCG GAGGGCGAGG ACGAGCGCGT GCTGCGCGCC
GCCCAGGCGA TGGTCGAAGA GACGACGGAT ATGCCGATCC TGATCGGACG ACCCGAGGTG
ATTGATGCCC GGATCGAACG GGCGGGGCTG ATCATTCGCG CGGGCCGCGA TTTTGAGCTG
GTCAACCCCG AAAACGATCC GCGCTACCGT GATTATTGGG AGACCTACCA CCAGATCATG
GCGCGTCACG GTGTGTCGCC CGATCTGGCC CGCGCGATCA TGCGCACCAA CACGACCGCA
ATTGGCGCCG TCATGGTGCA TCGCGAAGAG GCCGATAGCC TGATTTGTGG GACCTTCGGG
CAATACCTGT GGCACCTGAA TTACGTCAGC CAGATCCTGG GCGGCGACAA CCATCATCCT
GTCGGTGCGC TGAGTTTGAT GATCCTGGAG GACGGACCGC TGTTTATCGC GGACACGCAG
GTGCATCCGG TGCCCACGCC CGAGCAAATC GCAGAGACGA CAATTGGGTG CGCGCGGCAC
GTGCGGCGCT TTGGGGTGGA GCCGAAGATC GCGCTGTGCT CCGGCAGTCA GTTTGGCAAC
CTCGACAGCG TCTCGGGTCG CACCATGCGA GAGGCGTTGG CGAACCTGGA CAGTGAACCG
AGGGACTTCA TCTACGAGGG TGAGATGCAT GTCGATAGCG CGCTCGACGC AGAACTGCGC
GCCCGCGTTT TCCCCGATTG CAGGTTGGAA GGCGCGGCGA ATGCGTTGAT TTTTACTTCA
ACCGATGCTG CAAGTGCGAC GCGCAACATA CTGAAAATGA AAGCGAATGC TTTGGAGGTT
GGGCCGATCC TTATGGGGAT GGGCAACCAG GCCCATATCG TGACCCCGTC CATCACCGCG
CGTGGATTGC TCAACATCTC GGCGCTCGCG GGCACACCCG TCAGCCTCTA TGGGTAG
|
|---|
| Protein sequence | MSDDKKDGLR DAALAYHEHP RPGKLEIRAT KPLANGRDLA RAYSPGVAEA SLEIKVNSAN
ATRYTARGNL VGVVSNGTAV LGLGNIGALA SKPVMEGKAV LFKKFAGIDC FDIEVDESDP
EKLADIVCAL EPTFGAINLE DIKAPDCFIV EQLCRERMGI PVFHDDQHGT AIVVGAAATN
ALRVTGKVFE DIKVVSTGGG AAGIACLNML LKLGVRRENV FLCDIDGLVY EGRGGSTPQK
DAFAQGTEAK GLGDVIDDAD LFLGLSGPGV LTPEMVAKMA PAPIIFALAN PTPEILPDDA
RAVAPDAIIA TGRSDFPNQV NNVLCFPFIF RGALDVGATE INDAMQIACI EGIAAMARAT
TSAEAAAAYK GEQLTFGPEY LIPKPFDPRL SAVVASAVAE AAMASGVATR PIEDLDAYRA
KLNQSVFKSA LVMRPVFEAA ATAKRQIVFA EGEDERVLRA AQAMVEETTD MPILIGRPEV
IDARIERAGL IIRAGRDFEL VNPENDPRYR DYWETYHQIM ARHGVSPDLA RAIMRTNTTA
IGAVMVHREE ADSLICGTFG QYLWHLNYVS QILGGDNHHP VGALSLMILE DGPLFIADTQ
VHPVPTPEQI AETTIGCARH VRRFGVEPKI ALCSGSQFGN LDSVSGRTMR EALANLDSEP
RDFIYEGEMH VDSALDAELR ARVFPDCRLE GAANALIFTS TDAASATRNI LKMKANALEV
GPILMGMGNQ AHIVTPSITA RGLLNISALA GTPVSLYG
|
|---|
| |