| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2986 |
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| Symbol | deoA |
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| ID | 3935456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3005149 |
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| End bp | 3006459 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637905356 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_510928 |
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| Protein GI | 89055477 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02643] thymidine phosphorylase
[TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.433587 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACG CGCGCGCCAT TCTGACGAAG CTGCGCCAGG GCGACCGCCT GACGGAGGCA
GAGGTGTTCT GGTTCGCCGA AGGGCTTGCG ACCGGCGACG TCACCGACGC TCAGGCAGGC
GCGTTTGCCA TGGCCGTGTG CCAAAACGGA CTGGGCGAGG AGGGCCGGGT GCAACTGACC
CGCGCGATGC GAGAGACGGG CCGCGTGATG GCATGGCACC TCGACGGGCC GGTGATCGAC
AAACATTCAA CGGGTGGCGT AGGGGATTGC GTGTCGCTGC TGCTGGCACC TGCGCTGGCC
GCTTGCGGAG CGTTCGTGCC AATGATTTCT GGGCGCGGTT TGGGGCACAC GGGCGGCACG
CTGGATAAGT TGGAGGCCAT TCCGGGCTAC AACACAGACG TCTCCCCCGA TGATCTGCAA
GAGATCGTGG CTGATATCGG CTGTGCCATC GTGGGCGCAT CGGGTGATAT CGCGCCCGCT
GACAAGCGGC TTTACGCGGT GCGGGACGTG ACGGCCACCG TCGCCTCGGT CGATCTGATC
ACGGCGTCGA TCCTGTCAAA AAAGCTCGCC GCCGGGTTGG AGGCATTGGT TCTGGATGTG
AAGGTCGGCT CGGGCGCGTT CATGGGCACG GAGGCGGAGG CGTTGGGCCT GGCGCAAGCG
CTGGTCGCGA CGGCACAAGG CGCGGGGTGC ATGACCACGG CGTTGGTCAC CGACATGAAC
CAACCCCTGG CCAGCAGCGC GGGCAATGCG TTGGAACTGG CCGAGGTGAT GCAGGTTTTG
ACCGGAGCGG CGAAGGATAC GGCCCTGGAG CACCTGACCG TTGCATTGGG CGGAGAGGTC
CTGGCCCTGG GCGGTCTGGC GGCGGATGCG AGCGATGGCG AGGGCCGGAT CAGACGCGCG
CTGGCAGGCG GAGAGGCCGC GCGGGTCTTC GCAGAGATGG TGGCCGAACT GGGCGGCCCG
GTCGATTTCG TGGAGCGCTG GCCCGACAGG TTGCCGGCCG CGCCGGTGAT GATGGATGTG
CATCCGGGAC AGGCGGGATA CGTCACCGCC ATCGACACCC GCGCCCTGGG AGAGATCGTG
GTGCATCTGG GCGGCGGCCG CCTGCGGGAG GACGACCGGA TCGACCCGGC GGTTGGCCTG
TCGGACATCG CGCGGCTGGG CACGCGGGTG GACGATGTGA CACCCCTTGC GCGCATGCAC
ACAGCCGATG AGGACGAAGG CCGCGCGCTG GCCGCCAAGC TGCGCCGCGC ATTCACCCTG
TCGGACGCTG CGATAGATAC GCCGCCCCTG ATCCATGAGA GGATTGCCTG A
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| Protein sequence | MSDARAILTK LRQGDRLTEA EVFWFAEGLA TGDVTDAQAG AFAMAVCQNG LGEEGRVQLT
RAMRETGRVM AWHLDGPVID KHSTGGVGDC VSLLLAPALA ACGAFVPMIS GRGLGHTGGT
LDKLEAIPGY NTDVSPDDLQ EIVADIGCAI VGASGDIAPA DKRLYAVRDV TATVASVDLI
TASILSKKLA AGLEALVLDV KVGSGAFMGT EAEALGLAQA LVATAQGAGC MTTALVTDMN
QPLASSAGNA LELAEVMQVL TGAAKDTALE HLTVALGGEV LALGGLAADA SDGEGRIRRA
LAGGEAARVF AEMVAELGGP VDFVERWPDR LPAAPVMMDV HPGQAGYVTA IDTRALGEIV
VHLGGGRLRE DDRIDPAVGL SDIARLGTRV DDVTPLARMH TADEDEGRAL AAKLRRAFTL
SDAAIDTPPL IHERIA
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