| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2983 |
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| Symbol | upp |
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| ID | 3935453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3002328 |
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| End bp | 3002960 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637905353 |
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| Product | uracil phosphoribosyltransferase |
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| Protein accession | YP_510925 |
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| Protein GI | 89055474 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0035] Uracil phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.19059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.243328 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTGACC ATCTGACCAT CGTGGACCAC CCGCTGGTGC AGCACAAACT GACCCTGATG
CGCGACCGGG AGTGTTCGAC CAAATCCTTC CGGCAGCTCC TGCGCGAGAT CAGCCACCTT
CTGGCCTATG AAGTCACACG CAACCTGCCA ATGACCACGG TCACGGTGCA GACCCCGATC
CAGCCGATGG AGGCCCCCAC GATCATGGGC AAGAAGCTGG CGCTGGTGTC GATCCTGCGG
GCGGGCAATG GGCTGCTGGA TGGCATTCTG GAACTGGTGC CCAATGCCCG CGTGGGGTTT
GTGGGCCTGT ATCGGGACCC TGAGACGCTG CAACCGGTCG AATATTACTA CAAGGTCCCT
GAGGCGATGG AGGATCGGCT GACGATTGTG GTCGATCCGA TGCTGGCGAC GGGCAATTCC
TCCGCCGCCG CCGTGACCCG CCTGAAAGAG GGTGGCGCGC GCAACATCCG GTTTCTGTGC
CTGCTGGCGG CCCCGGAAGG CGTCGCGCGG ATGAAGGAGG CGCACCCCGA CGTGCCCATC
GTGACGGCGG CGTTGGACAG CCATTTGAAC GACCACGGCT ACATCGTTCC GGGTCTTGGG
GACGCGGGCG ACCGCATGTT CGGAACTAAA TAA
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| Protein sequence | MSDHLTIVDH PLVQHKLTLM RDRECSTKSF RQLLREISHL LAYEVTRNLP MTTVTVQTPI
QPMEAPTIMG KKLALVSILR AGNGLLDGIL ELVPNARVGF VGLYRDPETL QPVEYYYKVP
EAMEDRLTIV VDPMLATGNS SAAAVTRLKE GGARNIRFLC LLAAPEGVAR MKEAHPDVPI
VTAALDSHLN DHGYIVPGLG DAGDRMFGTK
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