Gene Jann_2969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2969 
Symbol 
ID3935439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2987844 
End bp2988236 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content62% 
IMG OID637905339 
ProductMerR family transcriptional regulator 
Protein accessionYP_510911 
Protein GI89055460 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0979935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0797223 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTG AAACCATGAC CATCCGCGAG ATGTGTGACG CCTACGACGT CACGCCGCGG 
ACCTTGCGCT TCTACGAATC CAAAGAGCTG CTCTACCCCA TCCGTGAGGG TCAGCGCCGC
CTCTTCACCC GCCGCGACCG CGCGCGCCTG AAGCTGATCC TGCGTGGCAA GCGCTTCGGC
TTCTCGCTGG AAGAAATCCG CCAACTGCTG GACCTCTATT ACGTCGGCGA CAGCCAGGAA
ACGCAGTTGG TCAGCACGCT GTCCATTGCC CGCGAACGCC TGAGCGACAT GGAACGACAA
CGCGCGGAGC TTGACGAAGC CATCGACGAG CTGCGCAGCC AGATGAGCCT AGTGGCCGAC
ATGCTGAAAA ACCCAAACAG CAGCGCCGCC TGA
 
Protein sequence
MTAETMTIRE MCDAYDVTPR TLRFYESKEL LYPIREGQRR LFTRRDRARL KLILRGKRFG 
FSLEEIRQLL DLYYVGDSQE TQLVSTLSIA RERLSDMERQ RAELDEAIDE LRSQMSLVAD
MLKNPNSSAA