| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2965 |
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| Symbol | |
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| ID | 3935435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2984589 |
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| End bp | 2985929 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637905335 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_510907 |
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| Protein GI | 89055456 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0142288 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGAGC CAGCCACCGC TAGCCCGTCA ACCCCGCCCA AACCGCTGAC GCACAGGCGC
GTGTTGAAAA TCGCGCTGCC CATTGTCGTG TCCAACGCCA CGGTGCCGCT TCTGGGGATC
GTGGATGTGG GCGTTGTGGG CCAGATGGGG GAGGCGGCCC CGATTGGCGC CGTGGGCATC
GGTGCGATCA TCCTGACGAG CGTCTTCTGG ATCTTCGGCT TTCTGCGCAT GGGCACAGTG
GGCCTTGTGG GGCAGGCGGA AGGGGCGGGG GATATGGCCG AGGTGTCGGC CATTCTGACC
CGTGCCCTGA TCATTGCCGG TGTGGGCGGA TTGCTTCTGA TCGCGGCCTA TCCTTTGATC
CTCTTCGCGG CCTTCTCATG GGAGCCTACG ACAGCGGAAG TGGAGGCGCT GGCCAAACAA
TACCTCTTTA TCCGCATCTG GACCGCGCCC TTCGCGATTT CCGTCTATGC GCTGACGGGC
TGGCTGATCG CGCAGGAACG CACGGGCGCT GTTTTCGCGG TGCAGCTGAT CATGAACAGC
TGCAACATCG CGCTGAATTT CCTGTTTGTG CTGGGGTTCG GCTGGGGGGT GGAGGGTGTG
GCACTGTCCA CGGCCATCGC CGAAATTGTG GGCGCGTCTG TGGGCCTGTG GTACTGCCGT
CGCGCCTTCG CCCGGCCCGC CTGGCGCGAT TGGCCGCGCG TGTTCGACCG CGCGCGTCTG
GTCAAGATGG CGCTTCTGAA CGTGGATATC CTGATCCGGT CGGCGCTGTT GGTGGCAATT
TTCACGTCGT TCACCTTTCT GGGGGCGCAA TTCGGGGATG TGACGCTGGC CGCAAATGAG
GTGTTGATTC AGTTCTTGTA CCTGACGGCC CATGCCATGG ATGGCTTCGC CTTTGCCGCC
GAGACGCTGA TTGCACGCGC CTATGGGCGG CGCGACCGGG CCCGCGTGCG TCGATCTGCA
ATCCTCACGT CGGTCTGGGG GCTGGCGATA TGTATCGCGA TGGGTGCCGC CTTCTGGCTT
GGGGGACCGT GGCTGATCGA CCTTCTGGCC AAAGACCCGG AGGTTCAGGT CGTCGCGCGG
GCCTATCTGC CGTGGATGGT CTTCGCGCCG CTTGTGGGCT GTGCGGCCTG GATGCTGGAC
GGAATTTTCA TCGGCGCGGC GCAGGGGCGC GACATGCGCA ACATGATGAT CCTGAGCGCA
TGCATTTACG TGGTCGCGGC CATTGTCCTG ATCCCGGTGC TCGGAAACCA TGGGGTCTGG
GCGGCGCTGT TGATCTCATT CGCGGCGCGC GGCGTGACCC TGGGAACCCG CTATCCGGCG
CTAGAGCGGG CGGTTGAGTG A
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| Protein sequence | MPEPATASPS TPPKPLTHRR VLKIALPIVV SNATVPLLGI VDVGVVGQMG EAAPIGAVGI
GAIILTSVFW IFGFLRMGTV GLVGQAEGAG DMAEVSAILT RALIIAGVGG LLLIAAYPLI
LFAAFSWEPT TAEVEALAKQ YLFIRIWTAP FAISVYALTG WLIAQERTGA VFAVQLIMNS
CNIALNFLFV LGFGWGVEGV ALSTAIAEIV GASVGLWYCR RAFARPAWRD WPRVFDRARL
VKMALLNVDI LIRSALLVAI FTSFTFLGAQ FGDVTLAANE VLIQFLYLTA HAMDGFAFAA
ETLIARAYGR RDRARVRRSA ILTSVWGLAI CIAMGAAFWL GGPWLIDLLA KDPEVQVVAR
AYLPWMVFAP LVGCAAWMLD GIFIGAAQGR DMRNMMILSA CIYVVAAIVL IPVLGNHGVW
AALLISFAAR GVTLGTRYPA LERAVE
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