Gene Jann_2948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2948 
Symbol 
ID3935418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2971438 
End bp2971911 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content63% 
IMG OID637905318 
Product(2Fe-2S)-binding 
Protein accessionYP_510890 
Protein GI89055439 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000161254 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAGACA GCAGAATGAT CTCGGTCACC GTGAATGGTG AGACCACCAG TGCCGCTGTT 
CCGGTGCGCC AGAACCTCGT GGATTTTCTC CGCAATACCC TTGGTTTAAC CGGCAGCCAT
GTGGGCTGCG AACACGGCGT CTGCGGGGCC TGCACGCTGG AGGTTGACGG CGCGATGGTC
CGTGGTTGCC TCATGCTGGC GGTGCAGGCC GACGGCGCGG CGATCACCAC GATTGAGGGA
TACGGGGACC GGGCAAGCGC CCTGCGCGCG GCCTTCACCG AGCGCAACGC CCTGCAATGC
GGCTACTGCA CGCCAGGGAT GTTGGCCAGC GCGGTGGAAT ACGTGGAAGG CGGCGGTACG
GCTGACCGCA CGGCGATCCG CGAACATCTG TCGGGCAATT ATTGTCGGTG CACGGGATAC
CAGTCCATCG TGGATGCCGT CTGTGATGTC ATCGACGGAA AGGTGCAGGC ATGA
 
Protein sequence
MSDSRMISVT VNGETTSAAV PVRQNLVDFL RNTLGLTGSH VGCEHGVCGA CTLEVDGAMV 
RGCLMLAVQA DGAAITTIEG YGDRASALRA AFTERNALQC GYCTPGMLAS AVEYVEGGGT
ADRTAIREHL SGNYCRCTGY QSIVDAVCDV IDGKVQA