| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2944 |
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| Symbol | |
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| ID | 3935414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2966960 |
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| End bp | 2967847 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637905314 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_510886 |
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| Protein GI | 89055435 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000229991 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000886209 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCCCTGT CCGACCGCAT TCCCTACCAA GCCATCGTGG ACCGCCCACG CCTGCACCTG
CCGGGTGACA AGCGCGTCGC CGTCTGGGTG ATCCTGAACG TCGAGGAATG GCGGATCGAA
AACCCGATGC CGCGCACCGT TCTGCCACCG CCCATGGGCC AGCCGCTTCT GCCCGATGTC
CCGAACTGGA GCTGGCATGA ATATGGCATG CGATCCGGCT TCTGGCGGCA ATGGAAGGCG
CTGGTGGATC GCAACATCCC GGTCTCGCTG GCGATCAATG GCAACGTGTG CACCAGTTAT
CCGCGCGTTG CCGGGGCTGC GTTGGAGGCA GGCTGGGAGT TCATGGGCCA CGGCTTCCTG
CAAGGCCCGA TGCACAGGCT GGACGACCAG GAGGGCGCGA TTGCGCAGGC CATGGACGGT
ATCGAGGCGT TCTGCGGCAC CCGCCCCCGG TCCTGGGAAA GCCCCGGCCT GACGGAGACG
GAAGATACGC TGGATCTGCT GCGCGCCGCT GGCGTGGACT ACGTCGCGGA TTGGGTCATC
GACGATCTGC CACAGGACAT CGACACGCCC CATGGGCGCA TCACCACCCT GCCCTATTCG
GTGGAAACTA ACGACATTGC TGTCTACGCG CTACAAGGCC ACCGATCTGA TGAATTCCTG
ACCCGCGGGC GCGATCAGTT TGACCGGCTC TATGCGGAGG GGGCGGAGAA CGCGCGGGTC
ATGGCGATTT CGATCCACCC CTATATCACC GGCGTGCCAC ATCGCATCCG CTATCTGGAA
GAGCTGCTGG ATTATGTCGG TGGCCATGAG GGCACGGCGT GGATGACCGC GAGCGAGATT
GGCGATTGGT ATCGCGCTGA GATGGCGCGG ATAGACGGAG GCACATGA
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| Protein sequence | MALSDRIPYQ AIVDRPRLHL PGDKRVAVWV ILNVEEWRIE NPMPRTVLPP PMGQPLLPDV
PNWSWHEYGM RSGFWRQWKA LVDRNIPVSL AINGNVCTSY PRVAGAALEA GWEFMGHGFL
QGPMHRLDDQ EGAIAQAMDG IEAFCGTRPR SWESPGLTET EDTLDLLRAA GVDYVADWVI
DDLPQDIDTP HGRITTLPYS VETNDIAVYA LQGHRSDEFL TRGRDQFDRL YAEGAENARV
MAISIHPYIT GVPHRIRYLE ELLDYVGGHE GTAWMTASEI GDWYRAEMAR IDGGT
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