Gene Jann_2931 details

Gene Information

• Locus tag: Jann_2931
• Symbol: cobN
• ID: 3935400
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Jannaschia sp. CCS1
• Kingdom: Bacteria
• Replicon accession: NC_007802
• Strand: -
• Start bp: 2952891
• End bp: 2956163
• Gene Length: 3273 bp
• Protein Length: 1090 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637905301
• Product: cobaltochelatase subunit CobN
• Protein accession: YP_510873
• Protein GI: 89055422
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases
• TIGRFAM ID: [TIGR02257] cobaltochelatase, CobN subunit

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.347121
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 6
• Fosmid unclonability p-value: 0.00673529
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGCACGTCG TATTCCGCGA AAGCCACGGG TTGGAGGAGA CGGAAACCCC GACCGATCTG 
GCGCAAACCC CGGCGGATCT GGTGGTTCTG TCCCTGTCGG ATTCCGATCT GGGTGCTTTT 
GCGGCAGGGT GGCACAGGTC AGCCGGCGCG TTGCCATCTC TGAGACTGGC CAATATCGCC 
GCCCTGAAGC ATCCGCTGTC CGTCGACACC TACATTGAGC AGACCCTGAG CGCGGCCAAG 
GGCATCCTGA TCCGCCTGAT CGGTGGCGTG CCTTATTGGC CCTACGGTCT GCAACAGATT 
GAAACGCTGT GCCGGGCCAA AGGTATCGCT CTGGCCGTCC TTCCCGCCGA TGGCCGCGAG 
GATACGCGGC TCGACGACAT CTCCACCCTG CCGGTTTCCA CCCTCCGTCG TCTTCAGCAT 
TTATGTGACG CGGGCGGGGA AGTGGCGGCC CAAGCGGCGC TGGCGCAGAT GGCGCTGGCA 
TCCGGTCTGT ATGCGGGACC GGTGAAAGGG GCAAAGGGCT TGCCGATGAT CGGGGGTTGG 
ACCCCGGAAG ATGGCCTCTG CTGCCCAGTG CTCGCGGGGC AGGGGAACGC ACCGCTGATC 
CTGGTTACCT TCTATCGGTC CTACCTCGTC TCCGCCGACC TTGCTCCGAT CCGTGCCCTG 
TTCACCGCGC TCCGGGCCAA GGGATTTTCT GTGATGGGCC TCTTCGCGCC CTCGCTCAAA 
GCGCCGATGG CCGCTGAGTG GACGGTCCGG CAGGTGACGC ATCTGTCCCC GGTCGTGATC 
GTCAACGCGA CGTCCTTCTC CGGCAAAGGA GCCTCCGGCG CGTCGCCTTT GGATGCAGCA 
GACGTCCCGG TCTTTCAGGT CGCGCTTGCC ACATCCGGAG AGGAGGCTTG GGTTGAGGCA 
GAACGAGGCC TGTCCCCCGC TGATCTTGCC ATGCACGTGG TCCTGCCAGA GGTAGACGGT 
CGCATCTTCG CCGGGGTCGC GTCGTTCAAA GAACCCGACG CGCGCGATCC GGACCTGCAA 
TTCGCGCGCT ATGCCCATAA GGCCCAACCG GACCGTATCA CCCACCTTGT GGACCGCATC 
GCCTCCTGGC ACGCATTGGC GACAAAACCG AAGACGGACC GCGCCACGGC GCTGGTCCTC 
TCCACCTATC CCGGACGGTC ATGGAACGCG GCCCATGCCG TGGGGCTGGA CGCTATTGCG 
TCGGCCAACG CGATCCTGCG GGACCTCTCG GATGCGGGCC ATGACGCCCT TGGCAACGTC 
GCCGGAGAAG ACCTGCAAGA CGCTCAACTC ATCTGGCCGT TCGAGACCTA CAAGGCTGCC 
CTCGCAACCC TTCCCCAAAC TCTCCAGGAC GCGCTCCACG TCGCATGGGG CAGCTGCGAG 
GAGGACGCGA CAGCGACCGA GGAGGGGCTG GCCCTCCCGA TCCTGCGCCG TGGGAAAACC 
CTCGTGGCCC TGCAACCCGA ACGCGGAACG CCTGCGCTTC GCGACGCCGA ATACCATGAT 
CTCGCCCGCG TTCCGCGCCA CGGCTACGTC GCCTTCTACC TGTGGATGCA GTGCCACGCT 
GATGTCCTGA TCCACATCGG TGCCCATGGC ACGCTGGAAT GGCTGCCGGG AAAATCGGTC 
GCGCTCTCCC GCACCTGCTG GCCAGACGCC CTGACAGGTG CGCTGCCCGT CATCTATCCC 
TTCATCGTCA ATGACCCCGG CGAGGCCGCG CAGGCCAAGC GCCGCATCGG TGCCGTCACC 
TTGGGCCATA TCCCGCCCCC CATGAAGGCT TCCAAAACGC CGACCCGGCT TGTGCGGTTG 
GAGGCGCTGC TGGACGAGTT TTCTAACGCC GATGGACTGG ATCCCAAACG CCGCGACCGC 
CTACAGGATG ACATCCGTGC CGAAGCCCAA GCCCTTGGCG TGGAGGGGGA TCTGGGCCTC 
GCCGCAGCCT CCTGCTCCGC CGAGGCGATC ACCCGGATCG ACCGGTTCGT CTGCGATGTG 
AAGGACAGCC AGTTCGGTGA CGGTCTCCAT GTCTGGGGCC AGCCGGAGCC CGGCCAATCT 
GCCTTCGACA GCGCTGCATC AGCCCGGTCG GAACGCGAAA GTCTTCTGGC CGCGCTGGAC 
GGCAGGCGCA TCGCGGCAGG CCCCTCCGGC TCTCCGTACC GGGGTCGGGC GGACGTGCTG 
CCAACGGGCC GCAATCTCTA CACAACCGAC CCGCGGTCGG TGCCCACCCG CGCGGCCTAT 
GCCCAGGGTG AGGCGCTGGC CGAAGAGTTG ATGCGCCGCC ATCTACAGGA TGAGGGCGAT 
TGGCCCAAGG GCCTGATCGT CGATCTCTGG GGCTCGGCCA CCATGCGTAC GGCCGGCGAG 
GAATTCGCCA TGGCTTTGTC GCTTCTGGGC GTGCGTCCGA TCTGGGATGC GGGATCTGAA 
CGCGTCTCGG GCATCGAGGT CCTGCCCATC GCCGAGCTTG ATCGCCCCCG CATCGACGTG 
ACCCTGCGGG TCTCAGGCCT GTTCCGGGAC GTGTTTCCAA CCCTCTCAGC GCTGTTCAAC 
CAAGCGATCC GCGCGCTGGC CGCCCGTGAT GAGGCCCCCG ACTGGAACCC TTATGTCGGG 
ACGGAGACGT CTCGCGTTTT CGGGCCGGCA CCGGGCAGTT TCGGCGTTGG GATAGCCCCC 
CAGATCGGTG ATTACTCGGA GGCTGCACGG GCCGCGGCCG GGGCGGCTTG GCTGGCCGCG 
TCATCCTACG CTTTGGATGG CGACACGATC CGCAAGGATG CGGAAGGTCT GCGCCGCCGC 
GTCGCCCAAG CCGATGCCTT CGTGCACCTG CAGGATCTGC CGGAAACCGA TGTCCTACTG 
GCCGAAGATT ACGCGACCCA TGAGGCGGGA TTCCTTGCCG CACAATCCCT CACGGGCGGC 
ACCGCCACGG CCTACCACCT CGACGTCACC AACCCCGCCA AGCCCCGTGC CCGGGCGCTG 
ACGGAAGAGA TTGCCCGCGT CGTCCTCGCG CGCGCCGCCA ATCCGGACTG GATCACCGGC 
ATGCGTCGCC ACGGCTTCCG GGGTGCCGCT GAAATCGCCG CGACACTTGA GAATATGGCC 
GCCTTCGCGC AGCTGGCCCC GGTTGTTCCC TCGCATCTTT TCGACGCGTA TTTTGAGGCG 
ACGTTGGGTC AGGTCGACGT GACGGCGTTT CTGTCCGATG CCAACCCGCA CGCACTCGCA 
GCCATGCGCG ACCGGTTCGC GCAGCTGCAT GCGGTAGGGC TATGGCAATC GCGGCGCAAC 
TCGATCCTTG CGGATCTGGA GGCGGCGGAA TGA 

 

Protein sequence

MHVVFRESHG LEETETPTDL AQTPADLVVL SLSDSDLGAF AAGWHRSAGA LPSLRLANIA 
ALKHPLSVDT YIEQTLSAAK GILIRLIGGV PYWPYGLQQI ETLCRAKGIA LAVLPADGRE 
DTRLDDISTL PVSTLRRLQH LCDAGGEVAA QAALAQMALA SGLYAGPVKG AKGLPMIGGW 
TPEDGLCCPV LAGQGNAPLI LVTFYRSYLV SADLAPIRAL FTALRAKGFS VMGLFAPSLK 
APMAAEWTVR QVTHLSPVVI VNATSFSGKG ASGASPLDAA DVPVFQVALA TSGEEAWVEA 
ERGLSPADLA MHVVLPEVDG RIFAGVASFK EPDARDPDLQ FARYAHKAQP DRITHLVDRI 
ASWHALATKP KTDRATALVL STYPGRSWNA AHAVGLDAIA SANAILRDLS DAGHDALGNV 
AGEDLQDAQL IWPFETYKAA LATLPQTLQD ALHVAWGSCE EDATATEEGL ALPILRRGKT 
LVALQPERGT PALRDAEYHD LARVPRHGYV AFYLWMQCHA DVLIHIGAHG TLEWLPGKSV 
ALSRTCWPDA LTGALPVIYP FIVNDPGEAA QAKRRIGAVT LGHIPPPMKA SKTPTRLVRL 
EALLDEFSNA DGLDPKRRDR LQDDIRAEAQ ALGVEGDLGL AAASCSAEAI TRIDRFVCDV 
KDSQFGDGLH VWGQPEPGQS AFDSAASARS ERESLLAALD GRRIAAGPSG SPYRGRADVL 
PTGRNLYTTD PRSVPTRAAY AQGEALAEEL MRRHLQDEGD WPKGLIVDLW GSATMRTAGE 
EFAMALSLLG VRPIWDAGSE RVSGIEVLPI AELDRPRIDV TLRVSGLFRD VFPTLSALFN 
QAIRALAARD EAPDWNPYVG TETSRVFGPA PGSFGVGIAP QIGDYSEAAR AAAGAAWLAA 
SSYALDGDTI RKDAEGLRRR VAQADAFVHL QDLPETDVLL AEDYATHEAG FLAAQSLTGG 
TATAYHLDVT NPAKPRARAL TEEIARVVLA RAANPDWITG MRRHGFRGAA EIAATLENMA 
AFAQLAPVVP SHLFDAYFEA TLGQVDVTAF LSDANPHALA AMRDRFAQLH AVGLWQSRRN 
SILADLEAAE