| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2920 |
|---|
| Symbol | |
|---|
| ID | 3935389 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 2943771 |
|---|
| End bp | 2944511 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637905290 |
|---|
| Product | precorrin 6A synthase |
|---|
| Protein accession | YP_510862 |
|---|
| Protein GI | 89055411 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2243] Precorrin-2 methylase |
|---|
| TIGRFAM ID | [TIGR02434] precorrin-6A synthase (deacetylating) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0390694 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTGT GGCTTATCGG GATTGGCACG GGCAACCCGG AGCATGTCAC GCTGGAGGCA
CAGCGCGCGT TGCGGGAGGC TGCCTTGATC CTGGTGCCGC GCAAAGGCCC CGATAAGTCC
GACCTGGCGG GCCTTCGCCA CAGGATCATC GCGGAGGCCG GTGCAACAGC GCCGGTTCAG
GAATTCGACT ATCCCACGCG CGATCCGAAC CTGCCCTACA AGCACCGTGT GCGGGCATGG
CATGATGAAA TTGCCCTTTG TTGGCAGGAT GCAATCGCCA AAGCCGATCC ACACGGCCCG
GTGGCGCTGC TGGTCTGGGG CGATCCATCA CTTTACGACA GTACGCTGCG GATCGCCACG
CGGCTGGAGC CTGCGCCAAA GCTGCGGGTC CTGCCCGGGA TCACCGCGCT CCACGCGCTC
ACGGCGGCCC ACGGCATCAC CTTCAATACC CTTGCAGGCG CTGTGACTGT CACGACCGGT
CGGCGGCTGC GTGACCATGG ATGGCCATAC GGGGCCGAAA CGGTGGCGGT GATGCTGGAC
GGAGATTGCG GTTTCCGGAG CCTCGATCGG ACGGATCTGA TGATCTGGTG GGGGGCGTAT
CTTGGGATGG AGGAGCAGAT CCTGGACCAC GGCCCCGTGG TCGAGGCGGG TCCGAGGATC
GTGGAGGCGC GGGCCAGAGC GCGGGCGGAC CACGGCTGGA TCATGGATAC GTATGTGTTG
CGTCCGATGG GCCTGGATTA A
|
|---|
| Protein sequence | MDLWLIGIGT GNPEHVTLEA QRALREAALI LVPRKGPDKS DLAGLRHRII AEAGATAPVQ
EFDYPTRDPN LPYKHRVRAW HDEIALCWQD AIAKADPHGP VALLVWGDPS LYDSTLRIAT
RLEPAPKLRV LPGITALHAL TAAHGITFNT LAGAVTVTTG RRLRDHGWPY GAETVAVMLD
GDCGFRSLDR TDLMIWWGAY LGMEEQILDH GPVVEAGPRI VEARARARAD HGWIMDTYVL
RPMGLD
|
|---|
| |