| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2909 |
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| Symbol | |
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| ID | 3935377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2929584 |
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| End bp | 2930276 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637905278 |
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| Product | 5-carboxymethyl-2-hydroxymuconate delta-isomerase |
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| Protein accession | YP_510851 |
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| Protein GI | 89055400 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.332948 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTTATG TGTTTGACCC GATTGCGCCA CCCTCGGTCG CCGTGGCCGG ACTGACGGCG
CATTTCCCGG TGCGCCGCAT CTTCTGCGTC GGCAGAAATT ATGCCGAGCA CGCGCGTGAA
ATGGGCCACG ATGACCGCGA ACCACCGTTC TTCTTTACCA AACCCGCTGA TGCGCTGGTC
GAAGATGGCG CGACTGTCCC CTACCCGCCC GGCACCGAGA ACCTTCATTT CGAGGCTGAA
CTTGTGGTCG CTATCGGCAC GCCCGGGCGC GCGATTGCCG AGGCCAATGC CCTGGATCAC
GTCTACGGAT ATGCTTGCGG CAATGACCTA ACCCGGCGCG ACATTCAGAC CGCGGCCAAG
AAGGCCGGAC GCCCGTGGGA TATGGCGAAA GGCTTCGATC TGTCCGCCGT CGTCGGGCCG
ATCCATCCCG TGTCAGAGGT CGGGCATCTG GAGCGCGGCC GCATCTCACT GACCCGCAAC
GGAGAGGTCC AGCAGACTGG CGATTTGGCG GATATGATCT GGTCGACGCC TGAAATCATC
GCCTATCTCT CGGGCCTGGT GGGCTTTGAA GCGGGTGATC TGATCATGAC CGGAACACCC
GCAGGGGTCG GCGCATTGGT GCCCGGCGAC ACGGCGGTGG TTTCCATCGC CGGCCTGCCC
GATTTGTCCG TCACCATAGG AGAGCCCGCA TGA
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| Protein sequence | MAYVFDPIAP PSVAVAGLTA HFPVRRIFCV GRNYAEHARE MGHDDREPPF FFTKPADALV
EDGATVPYPP GTENLHFEAE LVVAIGTPGR AIAEANALDH VYGYACGNDL TRRDIQTAAK
KAGRPWDMAK GFDLSAVVGP IHPVSEVGHL ERGRISLTRN GEVQQTGDLA DMIWSTPEII
AYLSGLVGFE AGDLIMTGTP AGVGALVPGD TAVVSIAGLP DLSVTIGEPA
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