| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2906 |
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| Symbol | |
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| ID | 3935374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2926037 |
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| End bp | 2926804 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637905275 |
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| Product | sorbitol dehydrogenase |
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| Protein accession | YP_510848 |
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| Protein GI | 89055397 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.205438 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGGC TGACGGGAAA AGGCGCGTTG ATCACCGGTG CCGCGCGCGG CATCGGGCGT
GCCTTTGCTG AACGCTACAT CGCGGAAGGC GCGCGGGTGG CGATTGCCGA TATCGACCTG
ACCCGTGCCG AGGCAACGGC GGCAGAGATC GGGGCCATTG CGGTCCAGAT GGATGTCTCT
TGCGAGGATT CCATAGCCGA CGGGGTCACT GCGGCTGCAG ACGCGTTGGG GCAGATCGAC
ATCCTGATCA ACAACGCCGC CGTCTTCACT GCCGCCCCGC TGACAGAGAT CACCTACAAG
GACTATGCGG ACGTCTTCGA CATCAACGTG GGCGGGACGC TGTTCACCAT GCAGGCGGTG
GCGAAACACA TGATTGACCG CGGCATCCGC GGCAAGATCA TCAACATGGC CTCCCAGGCC
GGCCGGAGGG GAGAGCCGTT GGTCGCCGTC TATTGCGCCA CGAAAGCCGC CGTCATCAGC
CTGACCCAAT CGGCCGGTCT CAACCTGATC GAGCACGGCA TCAACGTGAA TGCCATCGCA
CCGGGCGTGG TGGATGGGGA GCATTGGGAT GGTGTCGACG CGTTCTTTGC CAGACACGAA
GGCAAGGCGC CCGGCCAGAA GAAACGCGAA GTCGGCGAAG CTGTGCCTTA CGGACGCATG
GGCGTGGCCG AAGACCTGAC CGGCATGGCC GTCTTTCTGG CCAGCGACGA GGCGGAATAT
ATCGTGTCGC AGACCTACAA TGTGGACGGC GGACAATGGA TGAGCTGA
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| Protein sequence | MTRLTGKGAL ITGAARGIGR AFAERYIAEG ARVAIADIDL TRAEATAAEI GAIAVQMDVS
CEDSIADGVT AAADALGQID ILINNAAVFT AAPLTEITYK DYADVFDINV GGTLFTMQAV
AKHMIDRGIR GKIINMASQA GRRGEPLVAV YCATKAAVIS LTQSAGLNLI EHGINVNAIA
PGVVDGEHWD GVDAFFARHE GKAPGQKKRE VGEAVPYGRM GVAEDLTGMA VFLASDEAEY
IVSQTYNVDG GQWMS
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