| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2902 |
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| Symbol | |
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| ID | 3935370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2921837 |
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| End bp | 2923156 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637905271 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_510844 |
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| Protein GI | 89055393 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.489617 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCTCA AGAGAGCACT GAGCGCGACA ACAGCGCTTG CAATCTGCGC CGCGGGAACC
GCCGCATTCG CAGACGGCCA CTCGGCCACC ATCACCATCG CGACTGTGAA CAACGGCGAC
ATGGTGCGTA TGCAGGGCTA CACGGACCAG TTCACCGAAG AGACCGGCAT CGCCGTCGAG
TGGGTGACAC TGGAAGAGAA CGTGCTGCGC CAGCGCGTGA CCACGGACAT CACCACCAAC
GGTGGCCAGT TCGATATCAT GACAATCGGC ATGTACGAGA CCCCGATCTG GGGCTCCAAC
GGCTGGCTGG TTCCGTTGGA CGGCCTGTCC GACGACTACA ACGTCGGTGA CATCCTGCCT
GCAATGGCAG GCGGCCTGTC CCACGACGGC ACACTCTACG CGGCTCCGTT TTACGGCGAA
TCCTCGATGG TGATGTATCG CACGGACCTG ATGGAGGCCG CTGGCCTTGA AATGCCGGAA
GCGCCGACAT GGGAGTTCAT CCGCGAAGCC GCAGCGGCCA TGACCGACCG CGACAACGAC
ATCAACGGGA TCTGCCTGCG CGGCAAGCCC GGTTGGGGTG AGGGCGGTGC CTTCATTACA
GCAATGTCCA ACTCCTTCGG TGCCCGCTGG TTCGACATGG AATGGCAGGC GCAGTTCGAC
ACCCAGCCAT GGCTCGACAC GCTGACATTC TATCAGGGGA TGATGCAGGA ATCCGGCCCC
GCCGGTTATG CAACAAACGG CTTCACCGAG AACCTGAACC TGTTCAACCA GGGCCTCTGC
GGCATGTGGA TCGACGCCAC GGTTGCGGCA TCCTTCGTGA CGAACCCCGA TGACAGCACC
GTTGCGGACA GTGTGGGCTT TGCGCTGGCA CCCGACAACG GCTTGGGCGT CCGCTCCAAC
TGGCTTTGGG CCTGGGCACT GGCGATCCCC GCCGGGACGC AGCAGCAGGA CGAGGCGCTT
CAGTTCATTG AGTGGGCAAC ATCCACGGAC TATATCGAAC TGGTTGCCGA GAATGAGGGT
TGGGCCAATG TCCCCCCCGG TGCACGGACC TCTCTCTATG AGAACCCGAA CTACATCGAC
GTGCCGTTCG CGCAGATGAC GCTGGACTCG ATCCTGTCAG CTGACCCGAA CAACTCCACG
GTCGAAGAGA GCCCTTATGT GGGGATCCAG TTCGCGGCCA TCCCGGAGTT TGCCGGTATC
GCGACCGAAG TGAGCCAGGA ATTCTCGGCC TTCTACGCCG GTCAGCAGAC CGCGGAAGAG
GCGCTGGCGA ATGCTCAGGC GATCACTAAC GAGGCCATGG AAGCCGCTGG TTACCAGTAA
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| Protein sequence | MSLKRALSAT TALAICAAGT AAFADGHSAT ITIATVNNGD MVRMQGYTDQ FTEETGIAVE
WVTLEENVLR QRVTTDITTN GGQFDIMTIG MYETPIWGSN GWLVPLDGLS DDYNVGDILP
AMAGGLSHDG TLYAAPFYGE SSMVMYRTDL MEAAGLEMPE APTWEFIREA AAAMTDRDND
INGICLRGKP GWGEGGAFIT AMSNSFGARW FDMEWQAQFD TQPWLDTLTF YQGMMQESGP
AGYATNGFTE NLNLFNQGLC GMWIDATVAA SFVTNPDDST VADSVGFALA PDNGLGVRSN
WLWAWALAIP AGTQQQDEAL QFIEWATSTD YIELVAENEG WANVPPGART SLYENPNYID
VPFAQMTLDS ILSADPNNST VEESPYVGIQ FAAIPEFAGI ATEVSQEFSA FYAGQQTAEE
ALANAQAITN EAMEAAGYQ
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